RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 TMEM221A6NGB7 291 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 PLA2G6O60733 806 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 ALDH1A2O94788 518 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 YWHAQP27348 245 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 PRKAA1Q13131 559 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 INSCQ1MX18 579 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 OTUD3Q5T2D3 398 aaPredicted RBP9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 LIPMQ5VYY2 423 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 BORAQ6PGQ7 559 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 DEFB132Q7Z7B7 95 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 FAM35AQ86V20 835 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 CARM1Q86X55 608 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 DENND6AQ8IWF6 608 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 ZC3H7AQ8IWR0 971 aaKnown RBP9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 PARP8Q8N3A8 854 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 ZNF597Q96LX8 424 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 QKIQ96PU8 341 aaKnown RBP eCLIP9.98□□□□□ -0.813e-7■■■■□ 25.9
PTCHD4-202ENST00000398738 TBCBQ99426 244 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 EFHD1Q9BUP0 239 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 MUC3BQ9H195 1237 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 PCDHGA7Q9Y5G6 932 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 DGKBQ9Y6T7 804 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 MRASO14807 208 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 CLOCKO15516 846 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 DLX3O60479 287 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 ADAM23O75077 832 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 APBA3O96018 575 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 PFKMP08237 780 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 NMBRP28336 390 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 RELBQ01201 579 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 RHDQ02161 417 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 KIF19Q2TAC6 998 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 STXBP5Q5T5C0 1151 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 CLEC6AQ6EIG7 209 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 OLFML1Q6UWY5 402 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 DHFR2Q86XF0 187 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 ZNF280CQ8ND82 737 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 GABPB2Q8TAK5 448 aaPredicted RBP9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 MAGEE2Q8TD90 523 aaPredicted RBP9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 FTHL17Q9BXU8 183 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 DEFB129Q9H1M3 183 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 ATXN3LQ9H3M9 355 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 LRRC40Q9H9A6 602 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 MORF4L1Q9UBU8 362 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 SLC8A2Q9UPR5 921 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 CORINQ9Y5Q5 1042 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 SIPA1L1O43166 1804 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 SPATA31C2B4DYI2 1134 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 NOL3O60936 208 aaKnown RBP9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 INHAP05111 366 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 CHRM3P20309 590 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 CES1P23141 567 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 LRPAP1P30533 357 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 BMXP51813 675 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 GJA9P57773 515 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 MPP1Q00013 466 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 BFSP2Q13515 415 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 TMEM132BQ14DG7 1078 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 STXBP2Q15833 593 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 GALNT18Q6P9A2 607 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 PIGZQ86VD9 579 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 SIX6OS1Q8N1H7 587 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 LZTR1Q8N653 840 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 IRGQQ8WZA9 623 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 ASB9Q96DX5 294 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 CDHR1Q96JP9 859 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 PCYT2Q99447 389 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 MRPL45Q9BRJ2 306 aaKnown RBP9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 DRC3Q9H069 523 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 UPF3AQ9H1J1 476 aaKnown RBP9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 GBA2Q9HCG7 927 aaPredicted RBP9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 PCDH12Q9NPG4 1184 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 IGSF5Q9NSI5 407 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 SACM1LQ9NTJ5 587 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 IGSF9Q9P2J2 1179 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 WARS2Q9UGM6 360 aaKnown RBP9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 SYNPO2Q9UMS6 1093 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 H3BMQ9 156 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 TOR1BO14657 336 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 PPEF2O14830 753 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 MAFGO15525 162 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 CBFA2T3O75081 653 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 DDHD2O94830 711 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 ALDH1A1P00352 501 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 IQCF3P0C7M6 154 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 MAGEA6P43360 314 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 EIF1AXP47813 144 aaKnown RBP9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 EFNA5P52803 228 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 TXNL4AP83876 142 aaKnown RBP9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 POU6F1Q14863 301 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 RAB39AQ14964 217 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 FUT11Q495W5 492 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 STEAP4Q687X5 459 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 REP15Q6BDI9 236 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 DCDC5Q6ZRR9 648 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 KCTD8Q6ZWB6 473 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 LSMEM2Q8N112 164 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 NLGN1Q8N2Q7 840 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 SLC15A4Q8N697 577 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 PDZD8Q8NEN9 1154 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms