RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 HSP90AA4PQ58FG1 418 aa12.2□□□□□ -0.46
TFF3-202ENST00000398431 PRRT3Q5FWE3 981 aa12.2□□□□□ -0.46
TFF3-202ENST00000398431 LRRC73Q5JTD7 316 aa12.2□□□□□ -0.46
TFF3-202ENST00000398431 C6orf132Q5T0Z8 1188 aa12.2□□□□□ -0.46
TFF3-202ENST00000398431 INO80CQ6PI98 192 aaPredicted RBP12.2□□□□□ -0.46
TFF3-202ENST00000398431 RBM44Q6ZP01 1051 aaKnown RBP12.2□□□□□ -0.46
TFF3-202ENST00000398431 NYAP1Q6ZVC0 841 aa12.2□□□□□ -0.46
TFF3-202ENST00000398431 TTC7BQ86TV6 843 aa12.2□□□□□ -0.46
TFF3-202ENST00000398431 VPS36Q86VN1 386 aa12.2□□□□□ -0.46
TFF3-202ENST00000398431 PHACTR4Q8IZ21 702 aa12.2□□□□□ -0.46
TFF3-202ENST00000398431 RYBPQ8N488 228 aaPredicted RBP12.2□□□□□ -0.46
TFF3-202ENST00000398431 TP53I13Q8NBR0 393 aaPredicted RBP12.2□□□□□ -0.46
TFF3-202ENST00000398431 GPT2Q8TD30 523 aa12.2□□□□□ -0.46
TFF3-202ENST00000398431 BTN2A2Q8WVV5 523 aa12.2□□□□□ -0.46
TFF3-202ENST00000398431 CENPIQ92674 756 aaPredicted RBP12.2□□□□□ -0.46
TFF3-202ENST00000398431 TBATAQ96M53 351 aa12.2□□□□□ -0.46
TFF3-202ENST00000398431 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.2□□□□□ -0.46
TFF3-202ENST00000398431 LRRC61Q9BV99 259 aa12.2□□□□□ -0.46
TFF3-202ENST00000398431 STK33Q9BYT3 514 aa12.2□□□□□ -0.46
TFF3-202ENST00000398431 KLC2Q9H0B6 622 aa12.2□□□□□ -0.46
TFF3-202ENST00000398431 NCKIPSDQ9NZQ3 722 aa12.2□□□□□ -0.46
TFF3-202ENST00000398431 APOBEC3BQ9UH17 382 aaKnown RBP12.2□□□□□ -0.46
TFF3-202ENST00000398431 NOCTQ9UK39 431 aaKnown RBP12.2□□□□□ -0.46
TFF3-202ENST00000398431 CAPN8A6NHC0 703 aa12.19□□□□□ -0.46
TFF3-202ENST00000398431 C2CD4BA6NLJ0 364 aa12.19□□□□□ -0.46
TFF3-202ENST00000398431 F8VZ95 297 aa12.19□□□□□ -0.46
TFF3-202ENST00000398431 J3QKU1 62 aa12.19□□□□□ -0.46
TFF3-202ENST00000398431 NEMP1O14524 444 aa12.19□□□□□ -0.46
TFF3-202ENST00000398431 TCEA3O75764 348 aa12.19□□□□□ -0.46
TFF3-202ENST00000398431 PLEKP08567 350 aaPredicted RBP12.19□□□□□ -0.46
TFF3-202ENST00000398431 PRKCSHP14314 528 aaPredicted RBP12.19□□□□□ -0.46
TFF3-202ENST00000398431 MMP8P22894 467 aa12.19□□□□□ -0.46
TFF3-202ENST00000398431 ETFBP38117 255 aa12.19□□□□□ -0.46
TFF3-202ENST00000398431 EIF4A3P38919 411 aaKnown RBP12.19□□□□□ -0.46
TFF3-202ENST00000398431 HDAC4P56524 1084 aa12.19□□□□□ -0.46
TFF3-202ENST00000398431 FMO1Q01740 532 aa12.19□□□□□ -0.46
TFF3-202ENST00000398431 PTP4A2Q12974 167 aa12.19□□□□□ -0.46
TFF3-202ENST00000398431 PTK2BQ14289 1009 aa12.19□□□□□ -0.46
TFF3-202ENST00000398431 CDO1Q16878 200 aa12.19□□□□□ -0.46
TFF3-202ENST00000398431 RWDD4Q6NW29 188 aaKnown RBP12.19□□□□□ -0.46
TFF3-202ENST00000398431 GDPD4Q6W3E5 623 aa12.19□□□□□ -0.46
TFF3-202ENST00000398431 CLEC14AQ86T13 490 aa12.19□□□□□ -0.46
TFF3-202ENST00000398431 CCDC185Q8N715 623 aa12.19□□□□□ -0.46
TFF3-202ENST00000398431 SLC20A1Q8WUM9 679 aa12.19□□□□□ -0.46
TFF3-202ENST00000398431 CCDC3Q9BQI4 270 aa12.19□□□□□ -0.46
TFF3-202ENST00000398431 OSBPL1AQ9BXW6 950 aa12.19□□□□□ -0.46
TFF3-202ENST00000398431 TTYH3Q9C0H2 523 aa12.19□□□□□ -0.46
TFF3-202ENST00000398431 SAMSN1Q9NSI8 373 aaKnown RBP12.19□□□□□ -0.46
TFF3-202ENST00000398431 RABGEF1Q9UJ41 708 aa12.19□□□□□ -0.46
TFF3-202ENST00000398431 PADI4Q9UM07 663 aa12.19□□□□□ -0.46
TFF3-202ENST00000398431 MFHAS1Q9Y4C4 1052 aa12.19□□□□□ -0.46
TFF3-202ENST00000398431 LRRK1Q38SD2 2015 aa12.19□□□□□ -0.46
TFF3-202ENST00000398431 TENM4Q6N022 2769 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 B8ZZF3 427 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 INSIG1O15503 277 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 TM7SF2O76062 418 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 TNFSF15O95150 251 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 ANXA6P08133 673 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 UNGP13051 313 aaPredicted RBP12.18□□□□□ -0.46
TFF3-202ENST00000398431 PTPN9P43378 593 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 THOP1P52888 689 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 GEMIN4P57678 1058 aaKnown RBP12.18□□□□□ -0.46
TFF3-202ENST00000398431 CLN3Q13286 438 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 POLD3Q15054 466 aaPredicted RBP12.18□□□□□ -0.46
TFF3-202ENST00000398431 TPD52L1Q16890 204 aaPredicted RBP12.18□□□□□ -0.46
TFF3-202ENST00000398431 KLHL40Q2TBA0 621 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 DPCR1Q3MIW9 517 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 ARL13BQ3SXY8 428 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 TMEM52BQ4KMG9 183 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 FAXCQ5TGI0 409 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 KIAA1614Q5VZ46 1190 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 FOXR1Q6PIV2 292 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 MACC1Q6ZN28 852 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 STRADAQ7RTN6 431 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 FAM114A1Q8IWE2 563 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 PYROXD2Q8N2H3 581 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 WDR36Q8NI36 951 aaKnown RBP12.18□□□□□ -0.46
TFF3-202ENST00000398431 SLC30A5Q8TAD4 765 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 ANP32BQ92688 251 aaKnown RBP12.18□□□□□ -0.46
TFF3-202ENST00000398431 COL26A1Q96A83 441 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 ARHGEF26Q96DR7 871 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 PCDHB18PQ96TA0 734 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 GANQ9H2C0 597 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 DKK3Q9UBP4 350 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 HPCAL4Q9UM19 191 aa12.18□□□□□ -0.46
TFF3-202ENST00000398431 UNC13CQ8NB66 2214 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 A0A1W2PQM1 296 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 CYSRT1A8MQ03 144 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 TOR1BO14657 336 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 BUB1O43683 1085 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 NOBOXO60393 691 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 RAMP2O60895 175 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 GFPT2O94808 682 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 TMCC1O94876 653 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 KRT10P13645 584 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 C6P13671 934 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 ERCC5P28715 1186 aaPredicted RBP12.17□□□□□ -0.46
TFF3-202ENST00000398431 SDC4P31431 198 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 RFC1P35251 1148 aaPredicted RBP12.17□□□□□ -0.46
TFF3-202ENST00000398431 MLLT3P42568 568 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms