RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 CTBSQ01459 385 aa16.14■□□□□ 0.17
CHMP1A-201ENST00000397901 ARHGAP1Q07960 439 aa16.14■□□□□ 0.17
CHMP1A-201ENST00000397901 GRM3Q14832 879 aa16.14■□□□□ 0.17
CHMP1A-201ENST00000397901 NR1D2Q14995 579 aa16.14■□□□□ 0.17
CHMP1A-201ENST00000397901 NDUFA5Q16718 116 aa16.14■□□□□ 0.17
CHMP1A-201ENST00000397901 MGAT5BQ3V5L5 792 aa16.14■□□□□ 0.17
CHMP1A-201ENST00000397901 C6orf183Q5T699 404 aa16.14■□□□□ 0.17
CHMP1A-201ENST00000397901 ARMCX2Q7L311 632 aa16.14■□□□□ 0.17
CHMP1A-201ENST00000397901 PIGZQ86VD9 579 aa16.14■□□□□ 0.17
CHMP1A-201ENST00000397901 RP9Q8TA86 221 aaKnown RBP16.14■□□□□ 0.17
CHMP1A-201ENST00000397901 TMA16Q96EY4 203 aaKnown RBP16.14■□□□□ 0.17
CHMP1A-201ENST00000397901 CNDP1Q96KN2 507 aa16.14■□□□□ 0.17
CHMP1A-201ENST00000397901 CCDC138Q96M89 665 aa16.14■□□□□ 0.17
CHMP1A-201ENST00000397901 WDR41Q9HAD4 459 aa16.14■□□□□ 0.17
CHMP1A-201ENST00000397901 ERGIC3Q9Y282 383 aa16.14■□□□□ 0.17
CHMP1A-201ENST00000397901 PLXNA1Q9UIW2 1896 aa16.14■□□□□ 0.17
CHMP1A-201ENST00000397901 PFDN6O15212 129 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 TFEBP19484 476 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 NDUFV1P49821 464 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 KIZQ2M2Z5 673 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 SYPL2Q5VXT5 272 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 XKR5Q6UX68 686 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 PCYOX1LQ8NBM8 494 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 BEST2Q8NFU1 509 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 TRUB1Q8WWH5 349 aaKnown RBP16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 SYT17Q9BSW7 474 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 TDRD1Q9BXT4 1180 aaKnown RBP16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 RPF2Q9H7B2 306 aaKnown RBP16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 CDC14AQ9UNH5 594 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 ZSWIM8A7E2V4 1837 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 TIMM44O43615 452 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 H2AFYO75367 372 aaKnown RBP16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 ACADSBP45954 432 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 ART3Q13508 389 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 CAMK2BQ13554 666 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 NRF1Q16656 503 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 LIPMQ5VYY2 423 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 C9orf57Q5W0N0 161 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 TAPT1Q6NXT6 567 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 ZYG11AQ6WRX3 759 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 FIBCD1Q8N539 461 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 ADAMTS16Q8TE57 1224 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 PDCD6IPQ8WUM4 868 aaKnown RBP16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 DOK1Q99704 481 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 NPAS2Q99743 824 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 SNX25Q9H3E2 840 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 PIGVQ9NUD9 493 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 SETD4Q9NVD3 440 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 TLK1Q9UKI8 766 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 CDYLQ9Y232 598 aa16.13■□□□□ 0.17
CHMP1A-201ENST00000397901 CFAP99D6REC4 459 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 CLDN5O00501 218 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 SBK3P0C264 359 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 ERCC2P18074 760 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 NELFEP18615 380 aaKnown RBP16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 NMBRP28336 390 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 TTKP33981 857 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 SCNN1AP37088 669 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 BMXP51813 675 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 RABGGTBP53611 331 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 CDH15P55291 814 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 PAFAH1B3Q15102 231 aaKnown RBP16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 IL23RQ5VWK5 629 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 LYSMD3Q7Z3D4 306 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 KCTD4Q8WVF5 259 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 KLHL32Q96NJ5 620 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 MLPHQ9BV36 600 aaPredicted RBP16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 CASS4Q9NQ75 786 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 PTBP2Q9UKA9 531 aaKnown RBP16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 TMEM233B4DJY2 109 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 FAM47E-STBD1D6RA91 191 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 H3BMQ9 156 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 DCLK1O15075 740 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 KDM1AO60341 852 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 PTPN2P17706 415 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 NAT1P18440 290 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 ME2P23368 584 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 AKAP5P24588 427 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 GSSP48637 474 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 CD300CQ08708 224 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 IKBKEQ14164 716 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 ZNF460Q14592 562 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 CYP2A13Q16696 494 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 PHKG1Q16816 387 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 EML3Q32P44 896 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 ZNF792Q3KQV3 632 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 MAMDC4Q6UXC1 1216 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 HFE2Q6ZVN8 426 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 PGAM4Q8N0Y7 254 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 SPATA6LQ8N4H0 392 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 LRRC52Q8N7C0 313 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 ZSCAN18Q8TBC5 510 aaPredicted RBP16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 HSFY1Q96LI6 401 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 COG8Q96MW5 612 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 TSNARE1Q96NA8 513 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 APBA2Q99767 749 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 COQ10BQ9H8M1 238 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 RUVBL2Q9Y230 463 aaKnown RBP16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 SLC30A1Q9Y6M5 507 aa16.12■□□□□ 0.17
CHMP1A-201ENST00000397901 PLXNB2O15031 1838 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms