RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 PIGVQ9NUD9 493 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 PCDHB9Q9Y5E1 797 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 ZFP37Q9Y6Q3 630 aaPredicted RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 PDCD11Q14690 1871 aaKnown RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 CACNA1BQ00975 2339 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 ACSL4O60488 711 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 ENDOD1O94919 500 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 SERPINA6P08185 405 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 IDO1P14902 403 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 MRPS25P82663 173 aaKnown RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 LBRQ14739 615 aaKnown RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 ACAP2Q15057 778 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 FBXL19Q6PCT2 694 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 WFIKKN2Q8TEU8 576 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 QRFPRQ96P65 431 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 FAM126AQ9BYI3 521 aaPredicted RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 SLC28A3Q9HAS3 691 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 FZD10Q9ULW2 581 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 WDR90Q96KV7 1748 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 SGTAO43765 313 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 PTPN4P29074 926 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 TAS2R40P59535 323 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 PRKG2Q13237 762 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 FAM26DQ5JW98 314 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 KRT80Q6KB66 452 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 BHLHB9Q6PI77 547 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 EXOC3L1Q86VI1 746 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 SPDYE1Q8NFV5 336 aaPredicted RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 SUSD6Q92537 303 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 B3GNT5Q9BYG0 378 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 CIPCQ9C0C6 399 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 NDUFA13Q9P0J0 144 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 MTRRQ9UBK8 725 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 RIMKLBQ9ULI2 386 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 IQCF3P0C7M6 154 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 TLE2Q04725 743 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 INPP5AQ14642 412 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 ZRANB3Q5FWF4 1079 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 FBXO39Q8N4B4 442 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 NATD1Q8N6N6 113 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 KLHDC9Q8NEP7 349 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 DEC1Q9P2X7 70 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 RAP2CQ9Y3L5 183 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 ZNF236Q9UL36 1845 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 NRP1O14786 923 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 BNIP3LO60238 219 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 PCSK7Q16549 785 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 SAMD4BQ5PRF9 694 aaKnown RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 HP1BP3Q5SSJ5 553 aaPredicted RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 C1orf146Q5VVC0 180 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 OR56A4Q8NGH8 313 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 ADAM32Q8TC27 787 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 TLCD1Q96CP7 247 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 PARVBQ9HBI1 364 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 GRHL1Q9NZI5 618 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 AGO1Q9UL18 857 aaKnown RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 RHOBTB1O94844 696 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 PTPN3P26045 913 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ADAM17P78536 824 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 MKRN4PQ13434 485 aaPredicted RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 CNGA3Q16281 694 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 MARCH8Q5T0T0 291 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 RNF43Q68DV7 783 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ZMAT2Q96NC0 199 aaKnown RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 DZANK1Q9NVP4 752 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 PSME2Q9UL46 239 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 WDR91A4D1P6 747 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 POP4O95707 220 aaKnown RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ZNF30P17039 623 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 HTR1BP28222 390 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 AP1S2P56377 157 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 WNT3AP56704 352 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 KCNK10P57789 538 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 TAZQ16635 292 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ATP6AP1LQ52LC2 224 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 SETMARQ53H47 684 aaPredicted RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 PLEKHG4Q58EX7 1191 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 DCAF4L2Q8NA75 395 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 KYQ8NBH2 561 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 DTX3LQ8TDB6 740 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ZNF446Q9NWS9 450 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 SLC13A4Q9UKG4 626 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 RGSL1A5PLK6 1076 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 GOLGA8RI6L899 631 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 EPB42P16452 691 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 PSMB4P28070 264 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 GTF2A1P52655 376 aaPredicted RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 PNLIPRP1P54315 467 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ORC1Q13415 861 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 SPATS1Q496A3 300 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 PRR23BQ6ZRT6 265 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 OR4L1Q8NH43 312 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 LZICQ8WZA0 190 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ZNF75CPQ92670 426 aaPredicted RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 NT5C3BQ969T7 300 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 OLFM3Q96PB7 478 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 PGLYRP2Q96PD5 576 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 PENKP01210 267 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms