RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 HPS1Q92902 700 aa17.35■□□□□ 0.37
SIN3A-203ENST00000394949 YME1L1Q96TA2 773 aa17.35■□□□□ 0.37
SIN3A-203ENST00000394949 SHPRHQ149N8 1683 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 CSDE1O75534 798 aaKnown RBP17.34■□□□□ 0.37
SIN3A-203ENST00000394949 PIAS1O75925 651 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 MMP8P22894 467 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 USP39Q53GS9 565 aaKnown RBP17.34■□□□□ 0.37
SIN3A-203ENST00000394949 DRICH1Q6PGQ1 229 aaPredicted RBP17.34■□□□□ 0.37
SIN3A-203ENST00000394949 NEK10Q6ZWH5 1172 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 APTXQ7Z2E3 356 aaKnown RBP17.34■□□□□ 0.37
SIN3A-203ENST00000394949 GPC2Q8N158 579 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 RHOBTB2Q9BYZ6 727 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 NOL11Q9H8H0 719 aaKnown RBP17.34■□□□□ 0.37
SIN3A-203ENST00000394949 PTPRHQ9HD43 1115 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 CATSPERZQ9NTU4 200 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 ARIH1Q9Y4X5 557 aaPredicted RBP17.34■□□□□ 0.37
SIN3A-203ENST00000394949 CCNB1P14635 433 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 WARSP23381 471 aaKnown RBP17.34■□□□□ 0.37
SIN3A-203ENST00000394949 RNASEH2BQ5TBB1 312 aaKnown RBP17.34■□□□□ 0.37
SIN3A-203ENST00000394949 C11orf88Q6PI97 169 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 SLCO6A1Q86UG4 719 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 LPCAT1Q8NF37 534 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 DNAJB3Q8WWF6 145 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 KREMEN1Q96MU8 473 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 H3BMM5 538 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 PEX11AO75192 247 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 PAICSP22234 425 aaKnown RBP17.34■□□□□ 0.37
SIN3A-203ENST00000394949 POLD2P49005 469 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 SLC18A1P54219 525 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 EIF2B5Q13144 721 aaKnown RBP17.34■□□□□ 0.37
SIN3A-203ENST00000394949 MTX3Q5HYI7 312 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 ITIH5Q86UX2 942 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 EDEM1Q92611 657 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 MYLPFQ96A32 169 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 RHOJQ9H4E5 214 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 TAS2R1Q9NYW7 299 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 WBP11Q9Y2W2 641 aaKnown RBP17.34■□□□□ 0.37
SIN3A-203ENST00000394949 MYOM1P52179 1685 aa17.34■□□□□ 0.37
SIN3A-203ENST00000394949 CASTOR2A6NHX0 329 aa17.33■□□□□ 0.37
SIN3A-203ENST00000394949 H7C0S8 307 aa17.33■□□□□ 0.37
SIN3A-203ENST00000394949 AZIN1O14977 448 aa17.33■□□□□ 0.37
SIN3A-203ENST00000394949 CNPP09543 421 aaKnown RBP17.33■□□□□ 0.37
SIN3A-203ENST00000394949 IDH2P48735 452 aaKnown RBP17.33■□□□□ 0.37
SIN3A-203ENST00000394949 CDK9P50750 372 aaKnown RBP17.33■□□□□ 0.37
SIN3A-203ENST00000394949 RAB25P57735 213 aa17.33■□□□□ 0.37
SIN3A-203ENST00000394949 IQSEC1Q6DN90 963 aa17.33■□□□□ 0.37
SIN3A-203ENST00000394949 TXNDC11Q6PKC3 985 aa17.33■□□□□ 0.37
SIN3A-203ENST00000394949 ZNF621Q6ZSS3 439 aa17.33■□□□□ 0.37
SIN3A-203ENST00000394949 SOCS4Q8WXH5 440 aa17.33■□□□□ 0.37
SIN3A-203ENST00000394949 CPT1BQ92523 772 aa17.33■□□□□ 0.37
SIN3A-203ENST00000394949 TRNAU1APQ9NX07 287 aaKnown RBP17.33■□□□□ 0.37
SIN3A-203ENST00000394949 KIDINS220Q9ULH0 1771 aa17.33■□□□□ 0.37
SIN3A-203ENST00000394949 RNASEH1O60930 286 aaKnown RBP17.33■□□□□ 0.37
SIN3A-203ENST00000394949 PCNAP12004 261 aa17.33■□□□□ 0.37
SIN3A-203ENST00000394949 HPCAL1P37235 193 aa17.33■□□□□ 0.37
SIN3A-203ENST00000394949 OLR1P78380 273 aa17.33■□□□□ 0.37
SIN3A-203ENST00000394949 ECM1Q16610 540 aa17.33■□□□□ 0.37
SIN3A-203ENST00000394949 ZNF544Q6NX49 715 aa17.33■□□□□ 0.37
SIN3A-203ENST00000394949 CARNMT1Q8N4J0 409 aa17.33■□□□□ 0.37
SIN3A-203ENST00000394949 AKT1S1Q96B36 256 aa17.33■□□□□ 0.37
SIN3A-203ENST00000394949 REPS1Q96D71 796 aa17.33■□□□□ 0.37
SIN3A-203ENST00000394949 OSBPL10Q9BXB5 764 aa17.33■□□□□ 0.37
SIN3A-203ENST00000394949 LHX5Q9H2C1 402 aa17.33■□□□□ 0.37
SIN3A-203ENST00000394949 CLN6Q9NWW5 311 aa17.33■□□□□ 0.37
SIN3A-203ENST00000394949 IKZF3Q9UKT9 509 aa17.33■□□□□ 0.37
SIN3A-203ENST00000394949 BCLAF3A2AJT9 711 aaKnown RBP17.33■□□□□ 0.36
SIN3A-203ENST00000394949 CALCAP01258 141 aa17.33■□□□□ 0.36
SIN3A-203ENST00000394949 PEX2P28328 305 aa17.33■□□□□ 0.36
SIN3A-203ENST00000394949 STAT5AP42229 794 aa17.33■□□□□ 0.36
SIN3A-203ENST00000394949 FCHO2Q0JRZ9 810 aa17.33■□□□□ 0.36
SIN3A-203ENST00000394949 ANKS1BQ7Z6G8 1248 aa17.33■□□□□ 0.36
SIN3A-203ENST00000394949 MCFD2Q8NI22 146 aa17.33■□□□□ 0.36
SIN3A-203ENST00000394949 PANX3Q96QZ0 392 aa17.33■□□□□ 0.36
SIN3A-203ENST00000394949 YIPF2Q9BWQ6 316 aa17.33■□□□□ 0.36
SIN3A-203ENST00000394949 PRDM12Q9H4Q4 367 aa17.33■□□□□ 0.36
SIN3A-203ENST00000394949 ZDHHC18Q9NUE0 388 aa17.33■□□□□ 0.36
SIN3A-203ENST00000394949 GIN1Q9NXP7 522 aa17.33■□□□□ 0.36
SIN3A-203ENST00000394949 TCRBV7S2A1N4TA0A589 114 aa17.33■□□□□ 0.36
SIN3A-203ENST00000394949 LYPLA2O95372 231 aa17.33■□□□□ 0.36
SIN3A-203ENST00000394949 ACTR3P61158 418 aa17.33■□□□□ 0.36
SIN3A-203ENST00000394949 ASTE1Q2TB18 679 aaPredicted RBP17.33■□□□□ 0.36
SIN3A-203ENST00000394949 ACSBG2Q5FVE4 666 aa17.33■□□□□ 0.36
SIN3A-203ENST00000394949 STXBP5Q5T5C0 1151 aa17.33■□□□□ 0.36
SIN3A-203ENST00000394949 RTL3Q8N8U3 475 aaKnown RBP17.33■□□□□ 0.36
SIN3A-203ENST00000394949 C10orf82Q8WW14 230 aa17.33■□□□□ 0.36
SIN3A-203ENST00000394949 ZNF624Q9P2J8 865 aaPredicted RBP17.33■□□□□ 0.36
SIN3A-203ENST00000394949 ALDH1A2O94788 518 aa17.32■□□□□ 0.36
SIN3A-203ENST00000394949 NFKB1P19838 968 aa17.32■□□□□ 0.36
SIN3A-203ENST00000394949 TBX4P57082 545 aa17.32■□□□□ 0.36
SIN3A-203ENST00000394949 LSM3P62310 102 aaKnown RBP17.32■□□□□ 0.36
SIN3A-203ENST00000394949 TRIM48Q8IWZ4 208 aa17.32■□□□□ 0.36
SIN3A-203ENST00000394949 CDK20Q8IZL9 346 aa17.32■□□□□ 0.36
SIN3A-203ENST00000394949 MCOLN3Q8TDD5 553 aa17.32■□□□□ 0.36
SIN3A-203ENST00000394949 NPAS2Q99743 824 aa17.32■□□□□ 0.36
SIN3A-203ENST00000394949 FAM126AQ9BYI3 521 aaPredicted RBP17.32■□□□□ 0.36
SIN3A-203ENST00000394949 ZNF112Q9UJU3 913 aa17.32■□□□□ 0.36
SIN3A-203ENST00000394949 TIPRLO75663 272 aa17.32■□□□□ 0.36
SIN3A-203ENST00000394949 ITGA2P17301 1181 aa17.32■□□□□ 0.36
SIN3A-203ENST00000394949 ADORA2AP29274 412 aa17.32■□□□□ 0.36
SIN3A-203ENST00000394949 FGD3Q5JSP0 725 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms