RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 C12orf76Q8N812 135 aaPredicted RBP20.54■□□□□ 0.88
PRKCD-202ENST00000394729 DNAJC1Q96KC8 554 aaKnown RBP20.54■□□□□ 0.88
PRKCD-202ENST00000394729 KIFC1Q9BW19 673 aa20.54■□□□□ 0.88
PRKCD-202ENST00000394729 SLC46A2Q9BY10 475 aa20.54■□□□□ 0.88
PRKCD-202ENST00000394729 TSR3Q9UJK0 312 aaKnown RBP20.54■□□□□ 0.88
PRKCD-202ENST00000394729 MIA3Q5JRA6 1907 aa20.54■□□□□ 0.88
PRKCD-202ENST00000394729 A0A1B0GVM2 712 aa20.54■□□□□ 0.88
PRKCD-202ENST00000394729 TCAF2A6NFQ2 919 aa20.54■□□□□ 0.88
PRKCD-202ENST00000394729 TRIM24O15164 1050 aa20.54■□□□□ 0.88
PRKCD-202ENST00000394729 GRM6O15303 877 aa20.54■□□□□ 0.88
PRKCD-202ENST00000394729 GLUD1P00367 558 aa20.54■□□□□ 0.88
PRKCD-202ENST00000394729 ADH1AP07327 375 aa20.54■□□□□ 0.88
PRKCD-202ENST00000394729 SPRP35270 261 aaPredicted RBP20.54■□□□□ 0.88
PRKCD-202ENST00000394729 SERPINB9P50453 376 aa20.54■□□□□ 0.88
PRKCD-202ENST00000394729 PRAMEP78395 509 aa20.54■□□□□ 0.88
PRKCD-202ENST00000394729 RBM20Q5T481 1227 aaKnown RBP20.54■□□□□ 0.88
PRKCD-202ENST00000394729 SNX30Q5VWJ9 437 aa20.54■□□□□ 0.88
PRKCD-202ENST00000394729 MFSD6LQ8IWD5 586 aa20.54■□□□□ 0.88
PRKCD-202ENST00000394729 KIF2BQ8N4N8 673 aa20.54■□□□□ 0.88
PRKCD-202ENST00000394729 SH3RF2Q8TEC5 729 aa20.54■□□□□ 0.88
PRKCD-202ENST00000394729 ELMO2Q96JJ3 720 aa20.54■□□□□ 0.88
PRKCD-202ENST00000394729 CDK5RAP1Q96SZ6 601 aaKnown RBP20.54■□□□□ 0.88
PRKCD-202ENST00000394729 OMDQ99983 421 aa20.54■□□□□ 0.88
PRKCD-202ENST00000394729 TNKS2Q9H2K2 1166 aa20.54■□□□□ 0.88
PRKCD-202ENST00000394729 EMCNQ9ULC0 261 aa20.54■□□□□ 0.88
PRKCD-202ENST00000394729 CACNG3O60359 315 aa20.53■□□□□ 0.88
PRKCD-202ENST00000394729 C2P06681 752 aa20.53■□□□□ 0.88
PRKCD-202ENST00000394729 MAPKAPK2P49137 400 aa20.53■□□□□ 0.88
PRKCD-202ENST00000394729 ARF5P84085 180 aa20.53■□□□□ 0.88
PRKCD-202ENST00000394729 FASTKD1Q53R41 847 aaKnown RBP20.53■□□□□ 0.88
PRKCD-202ENST00000394729 ZNF449Q6P9G9 518 aa20.53■□□□□ 0.88
PRKCD-202ENST00000394729 C10orf107Q8IVU9 208 aa20.53■□□□□ 0.88
PRKCD-202ENST00000394729 RYBPQ8N488 228 aaPredicted RBP20.53■□□□□ 0.88
PRKCD-202ENST00000394729 RIN3Q8TB24 985 aa20.53■□□□□ 0.88
PRKCD-202ENST00000394729 MCOLN1Q9GZU1 580 aa20.53■□□□□ 0.88
PRKCD-202ENST00000394729 MARCH4Q9P2E8 410 aaPredicted RBP20.53■□□□□ 0.88
PRKCD-202ENST00000394729 COL4A4P53420 1690 aaPredicted RBP20.53■□□□□ 0.88
PRKCD-202ENST00000394729 ANAPC1Q9H1A4 1944 aa20.53■□□□□ 0.88
PRKCD-202ENST00000394729 CCT8L1PA6NM43 557 aa20.53■□□□□ 0.88
PRKCD-202ENST00000394729 TK2O00142 265 aa20.53■□□□□ 0.88
PRKCD-202ENST00000394729 CLDN11O75508 207 aa20.53■□□□□ 0.88
PRKCD-202ENST00000394729 SERPINF2P08697 491 aa20.53■□□□□ 0.88
PRKCD-202ENST00000394729 CDK18Q07002 472 aa20.53■□□□□ 0.88
PRKCD-202ENST00000394729 ARID3BQ8IVW6 561 aaPredicted RBP20.53■□□□□ 0.88
PRKCD-202ENST00000394729 CEP97Q8IW35 865 aa20.53■□□□□ 0.88
PRKCD-202ENST00000394729 NAT16Q8N8M0 369 aa20.53■□□□□ 0.88
PRKCD-202ENST00000394729 TDRD5Q8NAT2 981 aaKnown RBP20.53■□□□□ 0.88
PRKCD-202ENST00000394729 PLD4Q96BZ4 506 aa20.53■□□□□ 0.88
PRKCD-202ENST00000394729 SCYL1Q96KG9 808 aa20.53■□□□□ 0.88
PRKCD-202ENST00000394729 SMAD6O43541 496 aaKnown RBP20.52■□□□□ 0.88
PRKCD-202ENST00000394729 LILRB3O75022 631 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 ABL2P42684 1182 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 CCR10P46092 362 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 LIMK2P53671 638 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 ZNF33AQ06730 810 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 PPM1LQ5SGD2 360 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 C9orf50Q5SZB4 431 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 KCTD4Q8WVF5 259 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 ERP27Q96DN0 273 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 MTBPQ96DY7 904 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 NUMBLQ9Y6R0 609 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 ANKRD12Q6UB98 2062 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 PTPRSQ13332 1948 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 ITM2AO43736 263 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 CTPS1P17812 591 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 TEAD2Q15562 447 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 LRRC73Q5JTD7 316 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 GPR158Q5T848 1215 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 NEPROQ6NW34 567 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 ITIH5Q86UX2 942 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 E2F7Q96AV8 911 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 PRR11Q96HE9 360 aaPredicted RBP20.52■□□□□ 0.88
PRKCD-202ENST00000394729 FAM96AQ9H5X1 160 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 TASP1Q9H6P5 420 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 MAN1C1Q9NR34 630 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 ASAH2Q9NR71 780 aa20.52■□□□□ 0.88
PRKCD-202ENST00000394729 INSIG1O15503 277 aa20.51■□□□□ 0.87
PRKCD-202ENST00000394729 TMCC1O94876 653 aa20.51■□□□□ 0.87
PRKCD-202ENST00000394729 CA3P07451 260 aa20.51■□□□□ 0.87
PRKCD-202ENST00000394729 STK19P49842 368 aaPredicted RBP20.51■□□□□ 0.87
PRKCD-202ENST00000394729 YBEYP58557 167 aaPredicted RBP20.51■□□□□ 0.87
PRKCD-202ENST00000394729 PPIGQ13427 754 aaKnown RBP eCLIP20.51■□□□□ 0.872e-6■□□□□ 11.2
PRKCD-202ENST00000394729 SLC5A9Q2M3M2 681 aa20.51■□□□□ 0.87
PRKCD-202ENST00000394729 ZC3HC1Q86WB0 502 aaKnown RBP20.51■□□□□ 0.87
PRKCD-202ENST00000394729 OR13J1Q8NGT2 312 aa20.51■□□□□ 0.87
PRKCD-202ENST00000394729 CCT6BQ92526 530 aa20.51■□□□□ 0.87
PRKCD-202ENST00000394729 PDFQ9HBH1 243 aa20.51■□□□□ 0.87
PRKCD-202ENST00000394729 SCUBE2Q9NQ36 999 aa20.51■□□□□ 0.87
PRKCD-202ENST00000394729 DONSONQ9NYP3 566 aa20.51■□□□□ 0.87
PRKCD-202ENST00000394729 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.51■□□□□ 0.874e-6■■■□□ 17.2
PRKCD-202ENST00000394729 ARL2BPQ9Y2Y0 163 aa20.51■□□□□ 0.87
PRKCD-202ENST00000394729 BAIAP3O94812 1187 aa20.51■□□□□ 0.87
PRKCD-202ENST00000394729 ATXN1LP0C7T5 689 aaKnown RBP20.51■□□□□ 0.87
PRKCD-202ENST00000394729 ARCN1P48444 511 aaKnown RBP20.51■□□□□ 0.87
PRKCD-202ENST00000394729 ITGA9Q13797 1035 aa20.51■□□□□ 0.87
PRKCD-202ENST00000394729 GRTP1Q5TC63 336 aa20.51■□□□□ 0.87
PRKCD-202ENST00000394729 PDPK2PQ6A1A2 396 aa20.51■□□□□ 0.87
PRKCD-202ENST00000394729 TRMT2BQ96GJ1 504 aaKnown RBP20.51■□□□□ 0.87
PRKCD-202ENST00000394729 RAD9AQ99638 391 aa20.51■□□□□ 0.87
PRKCD-202ENST00000394729 MAGEH1Q9H213 219 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms