RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 LINC01553A4QN01 128 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 ANKRD65E5RJM6 399 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 INSIG1O15503 277 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 IL1BP01584 269 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 GSTA1P08263 222 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 F7P08709 466 aaPredicted RBP22.38■■□□□ 1.17
HMGA2-203ENST00000393578 ARF5P84085 180 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 CDH18Q13634 790 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 N4BP2L1Q5TBK1 243 aaPredicted RBP22.38■■□□□ 1.17
HMGA2-203ENST00000393578 NEPROQ6NW34 567 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 TRPM8Q7Z2W7 1104 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 C2CD4AQ8NCU7 369 aaPredicted RBP22.38■■□□□ 1.17
HMGA2-203ENST00000393578 RAB3IL1Q8TBN0 382 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 CALML6Q8TD86 181 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 TSSK1BQ9BXA7 367 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 SLC46A2Q9BY10 475 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 EMCNQ9ULC0 261 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 ARIH1Q9Y4X5 557 aaPredicted RBP22.38■■□□□ 1.17
HMGA2-203ENST00000393578 OR51B4Q9Y5P0 310 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 ZMPSTE24O75844 475 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 CSPG5O95196 566 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 FGF19O95750 216 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 NDST3O95803 873 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 BPGMP07738 259 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 GJA1P17302 382 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 GABRB3P28472 473 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 MZF1P28698 734 aaPredicted RBP22.38■■□□□ 1.17
HMGA2-203ENST00000393578 ABCG1P45844 678 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 RGRP47804 291 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 POLD2P49005 469 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 SCNN1BP51168 640 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 CTBP1Q13363 440 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 GRM3Q14832 879 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 FYB2Q5VWT5 728 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 KIAA0408Q6ZU52 694 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 NUDCD3Q8IVD9 361 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 DENND6AQ8IWF6 608 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 TTC16Q8NEE8 873 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 OR13J1Q8NGT2 312 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 PEX13Q92968 403 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 TRIB3Q96RU7 358 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 MECRQ9BV79 373 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 VPS28Q9UK41 221 aa22.38■■□□□ 1.17
HMGA2-203ENST00000393578 C5orf67F2Z3F1 127 aa22.37■■□□□ 1.17
HMGA2-203ENST00000393578 NRG2O14511 850 aaPredicted RBP22.37■■□□□ 1.17
HMGA2-203ENST00000393578 LDB2O43679 373 aa22.37■■□□□ 1.17
HMGA2-203ENST00000393578 PLIN3O60664 434 aa22.37■■□□□ 1.17
HMGA2-203ENST00000393578 SYN1P17600 705 aa22.37■■□□□ 1.17
HMGA2-203ENST00000393578 SLC1A2P43004 574 aa22.37■■□□□ 1.17
HMGA2-203ENST00000393578 EPHA5P54756 1037 aa22.37■■□□□ 1.17
HMGA2-203ENST00000393578 INO80DQ53TQ3 878 aaPredicted RBP22.37■■□□□ 1.17
HMGA2-203ENST00000393578 MPP7Q5T2T1 576 aa22.37■■□□□ 1.17
HMGA2-203ENST00000393578 RNF43Q68DV7 783 aa22.37■■□□□ 1.17
HMGA2-203ENST00000393578 ZNF470Q6ECI4 717 aa22.37■■□□□ 1.17
HMGA2-203ENST00000393578 TDRD5Q8NAT2 981 aaKnown RBP22.37■■□□□ 1.17
HMGA2-203ENST00000393578 MICAL1Q8TDZ2 1067 aa22.37■■□□□ 1.17
HMGA2-203ENST00000393578 NUDCD1Q96RS6 583 aa22.37■■□□□ 1.17
HMGA2-203ENST00000393578 C17orf80Q9BSJ5 609 aa22.37■■□□□ 1.17
HMGA2-203ENST00000393578 SCUBE2Q9NQ36 999 aa22.37■■□□□ 1.17
HMGA2-203ENST00000393578 MTCL1Q9Y4B5 1905 aaKnown RBP22.37■■□□□ 1.17
HMGA2-203ENST00000393578 A0A096LPK6 155 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 SNAP91O60641 907 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 CD160O95971 181 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 CSRP3P50461 194 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 ATG16L1Q676U5 607 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 BBS7Q8IWZ6 715 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 DDI1Q8WTU0 396 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 E2F7Q96AV8 911 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 CAB39LQ9H9S4 337 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 GGT7Q9UJ14 662 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 FBXO5Q9UKT4 447 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 SLC39A10Q9ULF5 831 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 ARHGAP26Q9UNA1 814 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 LEFTY2O00292 366 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 SLC7A4O43246 635 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 TMCC1O94876 653 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 MPP1Q00013 466 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 GALNT3Q14435 633 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 CCDC153Q494R4 210 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 MPPE1Q53F39 396 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 C16orf46Q6P387 395 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 CLEC14AQ86T13 490 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 MFN1Q8IWA4 741 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 BRSK1Q8TDC3 778 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 ALG14Q96F25 216 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 EXOC2Q96KP1 924 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 HCFC1R1Q9NWW0 138 aa22.36■■□□□ 1.17
HMGA2-203ENST00000393578 GSRP00390 522 aa22.35■■□□□ 1.17
HMGA2-203ENST00000393578 PROCP04070 461 aa22.35■■□□□ 1.17
HMGA2-203ENST00000393578 C2P06681 752 aa22.35■■□□□ 1.17
HMGA2-203ENST00000393578 TROVE2P10155 538 aaKnown RBP eCLIP22.35■■□□□ 1.17
HMGA2-203ENST00000393578 DDX6P26196 483 aaKnown RBP eCLIP22.35■■□□□ 1.171e-9■□□□□ 9.7
HMGA2-203ENST00000393578 CCR2P41597 374 aa22.35■■□□□ 1.17
HMGA2-203ENST00000393578 NSUN2Q08J23 767 aaKnown RBP eCLIP22.35■■□□□ 1.17
HMGA2-203ENST00000393578 LACTB2Q53H82 288 aaPredicted RBP22.35■■□□□ 1.17
HMGA2-203ENST00000393578 LINGO4Q6UY18 593 aa22.35■■□□□ 1.17
HMGA2-203ENST00000393578 DCAF4L2Q8NA75 395 aa22.35■■□□□ 1.17
HMGA2-203ENST00000393578 ACVR1CQ8NER5 493 aa22.35■■□□□ 1.17
HMGA2-203ENST00000393578 WFDC5Q8TCV5 224 aa22.35■■□□□ 1.17
HMGA2-203ENST00000393578 NSMCE3Q96MG7 304 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms