RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 MRM3Q9HC36 420 aaKnown RBP8.73□□□□□ -1.01
TDP1-203ENST00000393454 SPHK2Q9NRA0 654 aa8.73□□□□□ -1.01
TDP1-203ENST00000393454 SLC2A6Q9UGQ3 507 aa8.73□□□□□ -1.01
TDP1-203ENST00000393454 RANBP2P49792 3224 aaKnown RBP8.72□□□□□ -1.01
TDP1-203ENST00000393454 SLC9A3R1O14745 358 aaPredicted RBP8.72□□□□□ -1.01
TDP1-203ENST00000393454 PRPF4O43172 522 aaKnown RBP eCLIP8.72□□□□□ -1.01
TDP1-203ENST00000393454 NDST3O95803 873 aa8.72□□□□□ -1.01
TDP1-203ENST00000393454 EPOP01588 193 aa8.72□□□□□ -1.01
TDP1-203ENST00000393454 PIRTP0C851 137 aa8.72□□□□□ -1.01
TDP1-203ENST00000393454 TYRP14679 529 aa8.72□□□□□ -1.01
TDP1-203ENST00000393454 FSHRP23945 695 aa8.72□□□□□ -1.01
TDP1-203ENST00000393454 CNTFP26441 200 aa8.72□□□□□ -1.01
TDP1-203ENST00000393454 GP5P40197 560 aa8.72□□□□□ -1.01
TDP1-203ENST00000393454 PDE1BQ01064 536 aa8.72□□□□□ -1.01
TDP1-203ENST00000393454 USP4Q13107 963 aa8.72□□□□□ -1.01
TDP1-203ENST00000393454 FRG1Q14331 258 aaKnown RBP8.72□□□□□ -1.01
TDP1-203ENST00000393454 PITRM1Q5JRX3 1037 aa8.72□□□□□ -1.01
TDP1-203ENST00000393454 LY6G5CQ5SRR4 150 aa8.72□□□□□ -1.01
TDP1-203ENST00000393454 ATXN7L2Q5T6C5 722 aaPredicted RBP8.72□□□□□ -1.01
TDP1-203ENST00000393454 GRTP1Q5TC63 336 aa8.72□□□□□ -1.01
TDP1-203ENST00000393454 HHATQ5VTY9 493 aa8.72□□□□□ -1.01
TDP1-203ENST00000393454 RYBPQ8N488 228 aaPredicted RBP8.72□□□□□ -1.01
TDP1-203ENST00000393454 OTUD6BQ8N6M0 293 aa8.72□□□□□ -1.01
TDP1-203ENST00000393454 PAF1Q8N7H5 531 aa8.72□□□□□ -1.01
TDP1-203ENST00000393454 NAT16Q8N8M0 369 aa8.72□□□□□ -1.01
TDP1-203ENST00000393454 ATXN2LQ8WWM7 1075 aaKnown RBP8.72□□□□□ -1.01
TDP1-203ENST00000393454 ALKBH8Q96BT7 664 aaKnown RBP8.72□□□□□ -1.01
TDP1-203ENST00000393454 MRPL38Q96DV4 380 aaKnown RBP8.72□□□□□ -1.01
TDP1-203ENST00000393454 ATXN7L3BQ96GX2 97 aa8.72□□□□□ -1.01
TDP1-203ENST00000393454 CDCA3Q99618 268 aaPredicted RBP8.72□□□□□ -1.01
TDP1-203ENST00000393454 TM6SF2Q9BZW4 377 aa8.72□□□□□ -1.01
TDP1-203ENST00000393454 DZANK1Q9NVP4 752 aa8.72□□□□□ -1.01
TDP1-203ENST00000393454 LHX3Q9UBR4 397 aa8.72□□□□□ -1.01
TDP1-203ENST00000393454 PCDHGC4Q9Y5F7 938 aa8.72□□□□□ -1.01
TDP1-203ENST00000393454 RAI2Q9Y5P3 530 aa8.72□□□□□ -1.01
TDP1-203ENST00000393454 TRANK1O15050 2925 aa8.72□□□□□ -1.01
TDP1-203ENST00000393454 ANKRD36A6QL64 1941 aa8.71□□□□□ -1.01
TDP1-203ENST00000393454 GMNCA6NCL1 334 aa8.71□□□□□ -1.01
TDP1-203ENST00000393454 ERICH4A6NGS2 130 aa8.71□□□□□ -1.01
TDP1-203ENST00000393454 COPEO14579 308 aa8.71□□□□□ -1.01
TDP1-203ENST00000393454 SMAD6O43541 496 aaKnown RBP8.71□□□□□ -1.01
TDP1-203ENST00000393454 TYROBPO43914 113 aa8.71□□□□□ -1.01
TDP1-203ENST00000393454 PRKCGP05129 697 aa8.71□□□□□ -1.01
TDP1-203ENST00000393454 CR2P20023 1033 aa8.71□□□□□ -1.01
TDP1-203ENST00000393454 SPRP35270 261 aaPredicted RBP8.71□□□□□ -1.01
TDP1-203ENST00000393454 VIPR2P41587 438 aa8.71□□□□□ -1.01
TDP1-203ENST00000393454 IL9RQ01113 521 aa8.71□□□□□ -1.01
TDP1-203ENST00000393454 NSUN2Q08J23 767 aaKnown RBP eCLIP8.71□□□□□ -1.01
TDP1-203ENST00000393454 TSTD2Q5T7W7 516 aa8.71□□□□□ -1.01
TDP1-203ENST00000393454 GET4Q7L5D6 327 aaPredicted RBP8.71□□□□□ -1.01
TDP1-203ENST00000393454 SRLQ86TD4 932 aa8.71□□□□□ -1.01
TDP1-203ENST00000393454 ADGRG2Q8IZP9 1017 aa8.71□□□□□ -1.01
TDP1-203ENST00000393454 BANPQ8N9N5 519 aa8.71□□□□□ -1.01
TDP1-203ENST00000393454 LPCAT1Q8NF37 534 aa8.71□□□□□ -1.01
TDP1-203ENST00000393454 ST13P5Q8NFI4 369 aaPredicted RBP8.71□□□□□ -1.01
TDP1-203ENST00000393454 BCAS4Q8TDM0 211 aa8.71□□□□□ -1.01
TDP1-203ENST00000393454 PTPRN2Q92932 1015 aa8.71□□□□□ -1.01
TDP1-203ENST00000393454 TIFAQ96CG3 184 aa8.71□□□□□ -1.01
TDP1-203ENST00000393454 SGSM3Q96HU1 749 aa8.71□□□□□ -1.01
TDP1-203ENST00000393454 RPL10LQ96L21 214 aaKnown RBP8.71□□□□□ -1.01
TDP1-203ENST00000393454 NSMCE3Q96MG7 304 aa8.71□□□□□ -1.01
TDP1-203ENST00000393454 RANBP9Q96S59 729 aa8.71□□□□□ -1.01
TDP1-203ENST00000393454 SLC13A1Q9BZW2 595 aa8.71□□□□□ -1.01
TDP1-203ENST00000393454 IQCGQ9H095 443 aaKnown RBP8.71□□□□□ -1.01
TDP1-203ENST00000393454 SSU72Q9NP77 194 aaKnown RBP8.71□□□□□ -1.01
TDP1-203ENST00000393454 DUS2Q9NX74 493 aaKnown RBP8.71□□□□□ -1.01
TDP1-203ENST00000393454 PRKAG3Q9UGI9 489 aa8.71□□□□□ -1.01
TDP1-203ENST00000393454 INTS6Q9UL03 887 aaKnown RBP8.71□□□□□ -1.01
TDP1-203ENST00000393454 C2orf16Q68DN1 1984 aa8.71□□□□□ -1.01
TDP1-203ENST00000393454 HMX2A2RU54 273 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 BUD23O43709 281 aaKnown RBP8.71□□□□□ -1.02
TDP1-203ENST00000393454 BNIP3LO60238 219 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 RFPL1O75677 317 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 ZWINTO95229 277 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 PENKP01210 267 aaPredicted RBP8.71□□□□□ -1.02
TDP1-203ENST00000393454 ITGA2BP08514 1039 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 ALADP13716 330 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 WEE1P30291 646 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 HLA-FP30511 346 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 CTSOP43234 321 aaPredicted RBP8.71□□□□□ -1.02
TDP1-203ENST00000393454 ABCG1P45844 678 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 TMPRSS15P98073 1019 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 SLC18A2Q05940 514 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 SLC12A1Q13621 1099 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 LAMB3Q13751 1172 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 SLC14A2Q15849 920 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 ACCSLQ4AC99 568 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 FAM78AQ5JUQ0 283 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 ASTLQ6HA08 431 aaPredicted RBP8.71□□□□□ -1.02
TDP1-203ENST00000393454 NCEH1Q6PIU2 408 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 NLRP9Q7RTR0 991 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 OR6P1Q8NGX9 317 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 OR6K2Q8NGY2 324 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 TCP10LQ8TDR4 215 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 ATP2A3Q93084 1043 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 OTUB2Q96DC9 234 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 APOPT1Q96IL0 206 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 TRIB3Q96RU7 358 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 RBBP8Q99708 897 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 TDRD1Q9BXT4 1180 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms