RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 ZNF224Q9NZL3 707 aa1.37□□□□□ -2.19
SNORD28B-201ENST00000390993 OR6C3Q9NZP0 311 aa1.37□□□□□ -2.19
SNORD28B-201ENST00000390993 SIX4Q9UIU6 781 aa1.37□□□□□ -2.19
SNORD28B-201ENST00000390993 PCDHGB5Q9Y5G0 923 aa1.37□□□□□ -2.19
SNORD28B-201ENST00000390993 RAI2Q9Y5P3 530 aa1.37□□□□□ -2.19
SNORD28B-201ENST00000390993 SNX9Q9Y5X1 595 aa1.37□□□□□ -2.19
SNORD28B-201ENST00000390993 A0A0A0MQY5 61 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 hCG_1642624A0A1W2PR95 340 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 ARHGAP10A1A4S6 786 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 TARSL2A2RTX5 802 aaKnown RBP1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 ANTXRLA6NF34 631 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 CYSRT1A8MQ03 144 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 PRAC2D3DTV9 90 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 C16orf97H3BN30 126 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 DVL1O14640 695 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 SLC25A17O43808 307 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 PMS2P2O95744 297 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 PLGP00747 810 aaPredicted RBP1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 CSTBP04080 98 aaKnown RBP1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 WEE2P0C1S8 567 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 KRT10P13645 584 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 ACP5P13686 325 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 CTPS1P17812 591 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 RRM1P23921 792 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 DCTDP32321 178 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 GNL1P36915 607 aaPredicted RBP1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 CENPAP49450 140 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 VEGFCP49767 419 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 MVDP53602 400 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 DVL1P1P54792 670 aaPredicted RBP1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 ARSFP54793 590 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 GRSF1Q12849 480 aaKnown RBP eCLIP1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 CHAF1AQ13111 956 aaPredicted RBP1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 TRAF3Q13114 568 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 OS9Q13438 667 aaPredicted RBP1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 PKP1Q13835 747 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 DHX34Q14147 1143 aaKnown RBP1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 ANKRD1Q15327 319 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 SMAD1Q15797 465 aaKnown RBP1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 AP5B1Q2VPB7 878 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 CTXN3Q4LDR2 81 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 ATP13A5Q4VNC0 1218 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 CCDC38Q502W7 563 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 PPP6R3Q5H9R7 873 aaPredicted RBP1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 TBC1D9BQ66K14 1250 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 DENND1BQ6P3S1 775 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 GJB7Q6PEY0 223 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 SYT13Q7L8C5 426 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 SLC26A9Q7LBE3 791 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 ZSCAN2Q7Z7L9 614 aaPredicted RBP1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 ZC3HC1Q86WB0 502 aaKnown RBP1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 DSELQ8IZU8 1212 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 TMEM57Q8N5G2 664 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 WDSUB1Q8N9V3 476 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 SCCPDHQ8NBX0 429 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 DMBX1Q8NFW5 382 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 STT3BQ8TCJ2 826 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 FIG4Q92562 907 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 KTI12Q96EK9 354 aaPredicted RBP1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 SCMH1Q96GD3 660 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 RBM17Q96I25 401 aaKnown RBP1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 C3orf30Q96M34 536 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 ZNF570Q96NI8 536 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 NEUROD6Q96NK8 337 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 KXD1Q9BQD3 176 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 SPRY4Q9C004 299 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 WDR12Q9GZL7 423 aaKnown RBP1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 IL25Q9H293 177 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 MVB12BQ9H7P6 319 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 CHODLQ9H9P2 273 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 CLK4Q9HAZ1 481 aaKnown RBP1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 PLEKHA2Q9HB19 425 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 WDR6Q9NNW5 1121 aaKnown RBP1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 ABCF3Q9NUQ8 709 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 FAM118AQ9NWS6 357 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 KIF17Q9P2E2 1029 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 SLCO3A1Q9UIG8 710 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 KCND3Q9UK17 655 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 GDAQ9Y2T3 454 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 DERAQ9Y315 318 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 RRP7AQ9Y3A4 280 aaKnown RBP1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 CLDN16Q9Y5I7 305 aa1.36□□□□□ -2.19
SNORD28B-201ENST00000390993 A0A087WYN8 130 aa1.35□□□□□ -2.19
SNORD28B-201ENST00000390993 A0A0G2JPF8 293 aa1.35□□□□□ -2.19
SNORD28B-201ENST00000390993 A0A1W2PS18 150 aa1.35□□□□□ -2.19
SNORD28B-201ENST00000390993 TTC36A6NLP5 189 aa1.35□□□□□ -2.19
SNORD28B-201ENST00000390993 HNRNPCL3B7ZW38 293 aa1.35□□□□□ -2.19
SNORD28B-201ENST00000390993 F5H423 210 aaPredicted RBP1.35□□□□□ -2.19
SNORD28B-201ENST00000390993 P2RY10O00398 339 aa1.35□□□□□ -2.19
SNORD28B-201ENST00000390993 EBAG9O00559 213 aa1.35□□□□□ -2.19
SNORD28B-201ENST00000390993 ACKR2O00590 384 aa1.35□□□□□ -2.19
SNORD28B-201ENST00000390993 TIMM23O14925 209 aa1.35□□□□□ -2.19
SNORD28B-201ENST00000390993 IRAK2O43187 625 aa1.35□□□□□ -2.19
SNORD28B-201ENST00000390993 TSPAN3O60637 253 aa1.35□□□□□ -2.19
SNORD28B-201ENST00000390993 HNRNPCL1O60812 293 aaKnown RBP1.35□□□□□ -2.19
SNORD28B-201ENST00000390993 ADAP00813 363 aa1.35□□□□□ -2.19
SNORD28B-201ENST00000390993 CHRM4P08173 479 aa1.35□□□□□ -2.19
SNORD28B-201ENST00000390993 HNRNPCL4P0DMR1 293 aa1.35□□□□□ -2.19
SNORD28B-201ENST00000390993 SRCP12931 536 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms