RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 SETMARQ53H47 684 aaPredicted RBP17.22■□□□□ 0.35
RER1-202ENST00000378512 TMCO3Q6UWJ1 677 aa17.22■□□□□ 0.35
RER1-202ENST00000378512 GDPD4Q6W3E5 623 aa17.22■□□□□ 0.35
RER1-202ENST00000378512 GLRX5Q86SX6 157 aa17.22■□□□□ 0.35
RER1-202ENST00000378512 ZSCAN30Q86W11 494 aa17.22■□□□□ 0.35
RER1-202ENST00000378512 MFSD2AQ8NA29 543 aa17.22■□□□□ 0.35
RER1-202ENST00000378512 RHBDD1Q8TEB9 315 aa17.22■□□□□ 0.35
RER1-202ENST00000378512 RFFLQ8WZ73 363 aa17.22■□□□□ 0.35
RER1-202ENST00000378512 FAF2Q96CS3 445 aa17.22■□□□□ 0.35
RER1-202ENST00000378512 SERAC1Q96JX3 654 aa17.22■□□□□ 0.35
RER1-202ENST00000378512 ZNF599Q96NL3 588 aa17.22■□□□□ 0.35
RER1-202ENST00000378512 IPO11Q9UI26 975 aaKnown RBP17.22■□□□□ 0.35
RER1-202ENST00000378512 LAMA5O15230 3695 aa17.22■□□□□ 0.35
RER1-202ENST00000378512 COL5A1P20908 1838 aaPredicted RBP17.22■□□□□ 0.35
RER1-202ENST00000378512 A0A1W2PQU0 124 aa17.21■□□□□ 0.35
RER1-202ENST00000378512 PRAMEF26H0Y7S4 382 aa17.21■□□□□ 0.35
RER1-202ENST00000378512 MAFKO60675 156 aa17.21■□□□□ 0.35
RER1-202ENST00000378512 UGT2B4P06133 528 aa17.21■□□□□ 0.35
RER1-202ENST00000378512 MAT2AP31153 395 aaKnown RBP17.21■□□□□ 0.35
RER1-202ENST00000378512 ABL2P42684 1182 aa17.21■□□□□ 0.35
RER1-202ENST00000378512 HADHBP55084 474 aaKnown RBP17.21■□□□□ 0.35
RER1-202ENST00000378512 CDH6P55285 790 aa17.21■□□□□ 0.35
RER1-202ENST00000378512 RAD51Q06609 339 aa17.21■□□□□ 0.35
RER1-202ENST00000378512 OVGP1Q12889 678 aa17.21■□□□□ 0.35
RER1-202ENST00000378512 GRM3Q14832 879 aa17.21■□□□□ 0.35
RER1-202ENST00000378512 PDK2Q15119 407 aa17.21■□□□□ 0.35
RER1-202ENST00000378512 KIAA1161Q6NSJ0 714 aa17.21■□□□□ 0.35
RER1-202ENST00000378512 FBXL19Q6PCT2 694 aa17.21■□□□□ 0.35
RER1-202ENST00000378512 NETO2Q8NC67 525 aa17.21■□□□□ 0.35
RER1-202ENST00000378512 KLHL32Q96NJ5 620 aa17.21■□□□□ 0.35
RER1-202ENST00000378512 PSKH2Q96QS6 385 aa17.21■□□□□ 0.35
RER1-202ENST00000378512 ZNF670Q9BS34 389 aa17.21■□□□□ 0.35
RER1-202ENST00000378512 PTPRBP23467 1997 aa17.21■□□□□ 0.35
RER1-202ENST00000378512 PKD1L2Q7Z442 2459 aa17.21■□□□□ 0.35
RER1-202ENST00000378512 TMEM8BA6NDV4 472 aa17.21■□□□□ 0.34
RER1-202ENST00000378512 ZNF487B1APH4 448 aa17.21■□□□□ 0.34
RER1-202ENST00000378512 INSIG1O15503 277 aa17.21■□□□□ 0.34
RER1-202ENST00000378512 FLRT2O43155 660 aa17.21■□□□□ 0.34
RER1-202ENST00000378512 TSPAN6O43657 245 aa17.21■□□□□ 0.34
RER1-202ENST00000378512 PCDHGA12O60330 932 aa17.21■□□□□ 0.34
RER1-202ENST00000378512 DFNA5O60443 496 aa17.21■□□□□ 0.34
RER1-202ENST00000378512 KRT7P08729 469 aa17.21■□□□□ 0.34
RER1-202ENST00000378512 SERPINB6P35237 376 aa17.21■□□□□ 0.34
RER1-202ENST00000378512 RGRP47804 291 aa17.21■□□□□ 0.34
RER1-202ENST00000378512 MMRN1Q13201 1228 aa17.21■□□□□ 0.34
RER1-202ENST00000378512 PAFAH1B3Q15102 231 aaKnown RBP17.21■□□□□ 0.34
RER1-202ENST00000378512 SHBQ15464 509 aa17.21■□□□□ 0.34
RER1-202ENST00000378512 ADAT2Q7Z6V5 191 aaKnown RBP17.21■□□□□ 0.34
RER1-202ENST00000378512 VSIG1Q86XK7 387 aa17.21■□□□□ 0.34
RER1-202ENST00000378512 GATAD2AQ86YP4 633 aa17.21■□□□□ 0.34
RER1-202ENST00000378512 LRRC49Q8IUZ0 686 aa17.21■□□□□ 0.34
RER1-202ENST00000378512 CCDC170Q8IYT3 715 aa17.21■□□□□ 0.34
RER1-202ENST00000378512 RYBPQ8N488 228 aaPredicted RBP17.21■□□□□ 0.34
RER1-202ENST00000378512 TSEN2Q8NCE0 465 aaKnown RBP17.21■□□□□ 0.34
RER1-202ENST00000378512 PCDH19Q8TAB3 1148 aa17.21■□□□□ 0.34
RER1-202ENST00000378512 ASB12Q8WXK4 309 aa17.21■□□□□ 0.34
RER1-202ENST00000378512 SPOCK2Q92563 424 aa17.21■□□□□ 0.34
RER1-202ENST00000378512 PANX2Q96RD6 677 aa17.21■□□□□ 0.34
RER1-202ENST00000378512 TUBGCP5Q96RT8 1024 aa17.21■□□□□ 0.34
RER1-202ENST00000378512 ERVMER34-1Q9H9K5 563 aa17.21■□□□□ 0.34
RER1-202ENST00000378512 DSPP15924 2871 aaKnown RBP17.2■□□□□ 0.34
RER1-202ENST00000378512 TLR4O00206 839 aa17.2■□□□□ 0.34
RER1-202ENST00000378512 DFFAO00273 331 aa17.2■□□□□ 0.34
RER1-202ENST00000378512 MUSKO15146 869 aa17.2■□□□□ 0.34
RER1-202ENST00000378512 BUB1BO60566 1050 aaPredicted RBP17.2■□□□□ 0.34
RER1-202ENST00000378512 PALMO75781 387 aa17.2■□□□□ 0.34
RER1-202ENST00000378512 SUOXP51687 545 aa17.2■□□□□ 0.34
RER1-202ENST00000378512 NXPH1P58417 271 aa17.2■□□□□ 0.34
RER1-202ENST00000378512 RPS21P63220 83 aaKnown RBP17.2■□□□□ 0.34
RER1-202ENST00000378512 FGL2Q14314 439 aa17.2■□□□□ 0.34
RER1-202ENST00000378512 ANKRD20A8PQ5CZ79 823 aa17.2■□□□□ 0.34
RER1-202ENST00000378512 TMCO4Q5TGY1 634 aa17.2■□□□□ 0.34
RER1-202ENST00000378512 SEL1L3Q68CR1 1132 aa17.2■□□□□ 0.34
RER1-202ENST00000378512 CCNI2Q6ZMN8 369 aaPredicted RBP17.2■□□□□ 0.34
RER1-202ENST00000378512 SKA1Q96BD8 255 aa17.2■□□□□ 0.34
RER1-202ENST00000378512 ECHDC3Q96DC8 303 aa17.2■□□□□ 0.34
RER1-202ENST00000378512 FEM1CQ96JP0 617 aa17.2■□□□□ 0.34
RER1-202ENST00000378512 EXOC2Q96KP1 924 aa17.2■□□□□ 0.34
RER1-202ENST00000378512 NSMCE3Q96MG7 304 aa17.2■□□□□ 0.34
RER1-202ENST00000378512 ZNF641Q96N77 438 aaPredicted RBP17.2■□□□□ 0.34
RER1-202ENST00000378512 C1QTNF2Q9BXJ5 285 aa17.2■□□□□ 0.34
RER1-202ENST00000378512 SP110Q9HB58 689 aa17.2■□□□□ 0.34
RER1-202ENST00000378512 AASDHPPTQ9NRN7 309 aa17.2■□□□□ 0.34
RER1-202ENST00000378512 GPR27Q9NS67 375 aa17.2■□□□□ 0.34
RER1-202ENST00000378512 APOBEC2Q9Y235 224 aaKnown RBP17.2■□□□□ 0.34
RER1-202ENST00000378512 A0A1B0GTQ1 180 aa17.19■□□□□ 0.34
RER1-202ENST00000378512 PCDH8O95206 1070 aa17.19■□□□□ 0.34
RER1-202ENST00000378512 TIMP2P16035 220 aa17.19■□□□□ 0.34
RER1-202ENST00000378512 CR2P20023 1033 aa17.19■□□□□ 0.34
RER1-202ENST00000378512 HNRNPA2B1P22626 353 aaKnown RBP17.19■□□□□ 0.34
RER1-202ENST00000378512 CCT8P50990 548 aa17.19■□□□□ 0.34
RER1-202ENST00000378512 C21orf59P57076 290 aa17.19■□□□□ 0.34
RER1-202ENST00000378512 SLC10A7Q0GE19 358 aa17.19■□□□□ 0.34
RER1-202ENST00000378512 KRT81Q14533 505 aa17.19■□□□□ 0.34
RER1-202ENST00000378512 MESDQ14696 234 aa17.19■□□□□ 0.34
RER1-202ENST00000378512 CCDC157Q569K6 752 aa17.19■□□□□ 0.34
RER1-202ENST00000378512 LRRC38Q5VT99 294 aa17.19■□□□□ 0.34
RER1-202ENST00000378512 NCBP2-AS2Q69YL0 99 aa17.19■□□□□ 0.34
RER1-202ENST00000378512 ABI3BPQ7Z7G0 1075 aa17.19■□□□□ 0.34
RER1-202ENST00000378512 SRLQ86TD4 932 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms