RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 MLNP12872 115 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 PSMA3P25788 255 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 MAD2L1Q13257 205 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-201ENST00000378156 SLC10A6Q3KNW5 377 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 SH3D19Q5HYK7 790 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 TBCELQ5QJ74 424 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 DLK2Q6UY11 383 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 SLC26A9Q7LBE3 791 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 CACUL1Q86Y37 369 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 BDH2Q9BUT1 245 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 ACE2Q9BYF1 805 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-201ENST00000378156 CEP44Q9C0F1 390 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 FAM124BQ9H5Z6 455 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-201ENST00000378156 ASB8Q9H765 288 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 PNPOQ9NVS9 261 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 NR2E3Q9Y5X4 410 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 PHLPP1O60346 1717 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 BPGMP07738 259 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 LTA4HP09960 611 aaKnown RBP15.14■□□□□ 0.01
NPHP4-201ENST00000378156 TCF4P15884 667 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 CYP3A5P20815 502 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 USP4Q13107 963 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 PLCL1Q15111 1095 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 NET1Q7Z628 596 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-201ENST00000378156 HJURPQ8NCD3 748 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-201ENST00000378156 FAM120BQ96EK7 910 aaKnown RBP15.14■□□□□ 0.01
NPHP4-201ENST00000378156 SETD1AO15047 1707 aaKnown RBP15.14■□□□□ 0.01
NPHP4-201ENST00000378156 C1orf232A0A0U1RR37 186 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 C22orf31O95567 290 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 CHI3L1P36222 383 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-201ENST00000378156 GABRB2P47870 512 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 LILRA4P59901 499 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 ENPEPQ07075 957 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 TAF10Q12962 218 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 TARBP2Q15633 366 aaKnown RBP15.14■□□□□ 0.01
NPHP4-201ENST00000378156 INAQ16352 499 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 SETMARQ53H47 684 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-201ENST00000378156 B3GNT6Q6ZMB0 384 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 SPATA6LQ8N4H0 392 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 KCTD4Q8WVF5 259 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 RABGEF1Q9UJ41 708 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 NDUFAF1Q9Y375 327 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 BIRC5O15392 142 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 SMNDC1O75940 238 aaKnown RBP eCLIP15.13■□□□□ 0.01
NPHP4-201ENST00000378156 SERPINA6P08185 405 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 FOXN2P32314 431 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 GRIA4P48058 902 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 CLCN5P51795 746 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 HEATR4Q86WZ0 1026 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 ZC3H3Q8IXZ2 948 aaKnown RBP15.13■□□□□ 0.01
NPHP4-201ENST00000378156 NKAPQ8N5F7 415 aaKnown RBP15.13■□□□□ 0.01
NPHP4-201ENST00000378156 ALG9Q9H6U8 611 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 CAB39LQ9H9S4 337 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 RCOR3Q9P2K3 495 aaPredicted RBP15.13■□□□□ 0.01
NPHP4-201ENST00000378156 LRP6O75581 1613 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 CLOCKO15516 846 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 COX4I1P13073 169 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 DGKAP23743 735 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 RRM2P31350 389 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 ATP1A4Q13733 1029 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 REM2Q8IYK8 340 aaPredicted RBP15.13■□□□□ 0.01
NPHP4-201ENST00000378156 ULK2Q8IYT8 1036 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 OMA1Q96E52 524 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 HGH1Q9BTY7 390 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 AHSPQ9NZD4 102 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 FBXO5Q9UKT4 447 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 EPHA3P29320 983 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 ABL2P42684 1182 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 ROR2Q01974 943 aaKnown RBP15.13■□□□□ 0.01
NPHP4-201ENST00000378156 RIPK1Q13546 671 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 FAM182AQ5T1J6 154 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 RSBN1Q5VWQ0 802 aaPredicted RBP15.13■□□□□ 0.01
NPHP4-201ENST00000378156 TXNRD3NBQ6F5E7 133 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 PPP4R4Q6NUP7 873 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 POTEHQ6S545 545 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 CLVS1Q8IUQ0 354 aaPredicted RBP15.13■□□□□ 0.01
NPHP4-201ENST00000378156 OR8H2Q8N162 312 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 C19orf18Q8NEA5 215 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 EXOC2Q96KP1 924 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 FAM210AQ96ND0 272 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 ATP13A3Q9H7F0 1226 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 MIEF1Q9NQG6 463 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 ARL15Q9NXU5 204 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 OPTCQ9UBM4 332 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 PDE4DIPQ5VU43 2346 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 C5orf60A6NFR6 353 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 GSC2O15499 205 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 OR4Q2P0C623 313 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 PTPN3P26045 913 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 PIK3CGP48736 1102 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 WNT3AP56704 352 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 CDK18Q07002 472 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 CTBP1Q13363 440 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 STXBP5Q5T5C0 1151 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.13■□□□□ 0.01
NPHP4-201ENST00000378156 CD99L2Q8TCZ2 262 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 BTN2A2Q8WVV5 523 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 CAPNS2Q96L46 248 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 NFKBIZQ9BYH8 718 aa15.13■□□□□ 0.01
NPHP4-201ENST00000378156 FAM126AQ9BYI3 521 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms