RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 TRIP6Q15654 476 aaKnown RBP22.36■■□□□ 1.17
SRM-201ENST00000376957 MARC1Q5VT66 337 aa22.36■■□□□ 1.17
SRM-201ENST00000376957 TSEN2Q8NCE0 465 aaKnown RBP22.36■■□□□ 1.17
SRM-201ENST00000376957 RHBDD1Q8TEB9 315 aa22.36■■□□□ 1.17
SRM-201ENST00000376957 TSC1Q92574 1164 aa22.36■■□□□ 1.17
SRM-201ENST00000376957 KLK6Q92876 244 aa22.36■■□□□ 1.17
SRM-201ENST00000376957 ZNF830Q96NB3 372 aaPredicted RBP22.36■■□□□ 1.17
SRM-201ENST00000376957 PSKH2Q96QS6 385 aa22.36■■□□□ 1.17
SRM-201ENST00000376957 HS3ST3A1Q9Y663 406 aa22.36■■□□□ 1.17
SRM-201ENST00000376957 ASCC3Q8N3C0 2202 aaKnown RBP22.36■■□□□ 1.17
SRM-201ENST00000376957 A0A1B0GTQ1 180 aa22.35■■□□□ 1.17
SRM-201ENST00000376957 A0A1W2PQ67 120 aa22.35■■□□□ 1.17
SRM-201ENST00000376957 GOLGA6L6A8MZA4 724 aa22.35■■□□□ 1.17
SRM-201ENST00000376957 H0Y8X5 98 aa22.35■■□□□ 1.17
SRM-201ENST00000376957 PAK4O96013 591 aaPredicted RBP22.35■■□□□ 1.17
SRM-201ENST00000376957 ITGAVP06756 1048 aa22.35■■□□□ 1.17
SRM-201ENST00000376957 PRLRP16471 622 aa22.35■■□□□ 1.17
SRM-201ENST00000376957 GRK6P43250 576 aa22.35■■□□□ 1.17
SRM-201ENST00000376957 SCNN1BP51168 640 aa22.35■■□□□ 1.17
SRM-201ENST00000376957 SIM1P81133 766 aaPredicted RBP22.35■■□□□ 1.17
SRM-201ENST00000376957 DPYSL3Q14195 570 aa22.35■■□□□ 1.17
SRM-201ENST00000376957 TMEM259Q4ZIN3 620 aa22.35■■□□□ 1.17
SRM-201ENST00000376957 ANKRD20A8PQ5CZ79 823 aa22.35■■□□□ 1.17
SRM-201ENST00000376957 SEL1L3Q68CR1 1132 aa22.35■■□□□ 1.17
SRM-201ENST00000376957 TMTC1Q8IUR5 882 aa22.35■■□□□ 1.17
SRM-201ENST00000376957 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.35■■□□□ 1.17
SRM-201ENST00000376957 ASB12Q8WXK4 309 aa22.35■■□□□ 1.17
SRM-201ENST00000376957 CALR3Q96L12 384 aaKnown RBP22.35■■□□□ 1.17
SRM-201ENST00000376957 A6NNZ2 444 aa22.34■■□□□ 1.17
SRM-201ENST00000376957 RNF103O00237 685 aa22.34■■□□□ 1.17
SRM-201ENST00000376957 FPGTO14772 594 aa22.34■■□□□ 1.17
SRM-201ENST00000376957 GIPC1O14908 333 aa22.34■■□□□ 1.17
SRM-201ENST00000376957 TRIM16O95361 564 aa22.34■■□□□ 1.17
SRM-201ENST00000376957 WNT1P04628 370 aa22.34■■□□□ 1.17
SRM-201ENST00000376957 THEGLP0DJG4 465 aa22.34■■□□□ 1.17
SRM-201ENST00000376957 MX2P20592 715 aa22.34■■□□□ 1.17
SRM-201ENST00000376957 TCEAL1Q15170 157 aa22.34■■□□□ 1.17
SRM-201ENST00000376957 RALGPS1Q5JS13 557 aa22.34■■□□□ 1.17
SRM-201ENST00000376957 LRRC38Q5VT99 294 aa22.34■■□□□ 1.17
SRM-201ENST00000376957 VSIG1Q86XK7 387 aa22.34■■□□□ 1.17
SRM-201ENST00000376957 RHOT1Q8IXI2 618 aa22.34■■□□□ 1.17
SRM-201ENST00000376957 TMEM145Q8NBT3 493 aa22.34■■□□□ 1.17
SRM-201ENST00000376957 NETO2Q8NC67 525 aa22.34■■□□□ 1.17
SRM-201ENST00000376957 DDX56Q9NY93 547 aaKnown RBP22.34■■□□□ 1.17
SRM-201ENST00000376957 ZFR2Q9UPR6 939 aaKnown RBP22.34■■□□□ 1.17
SRM-201ENST00000376957 CACNA1AO00555 2505 aa22.34■■□□□ 1.17
SRM-201ENST00000376957 LRRD1A4D1F6 860 aa22.33■■□□□ 1.17
SRM-201ENST00000376957 KCNK3O14649 394 aa22.33■■□□□ 1.17
SRM-201ENST00000376957 WNT9AO14904 365 aa22.33■■□□□ 1.17
SRM-201ENST00000376957 SPOPO43791 374 aa22.33■■□□□ 1.17
SRM-201ENST00000376957 MAFKO60675 156 aa22.33■■□□□ 1.17
SRM-201ENST00000376957 TM7SF2O76062 418 aa22.33■■□□□ 1.17
SRM-201ENST00000376957 IL4RP24394 825 aa22.33■■□□□ 1.17
SRM-201ENST00000376957 MMRN1Q13201 1228 aa22.33■■□□□ 1.17
SRM-201ENST00000376957 PAFAH1B3Q15102 231 aaKnown RBP22.33■■□□□ 1.17
SRM-201ENST00000376957 UGP2Q16851 508 aa22.33■■□□□ 1.17
SRM-201ENST00000376957 DBX2Q6ZNG2 339 aa22.33■■□□□ 1.17
SRM-201ENST00000376957 ARHGAP36Q6ZRI8 547 aa22.33■■□□□ 1.17
SRM-201ENST00000376957 DENND6BQ8NEG7 585 aa22.33■■□□□ 1.17
SRM-201ENST00000376957 LENG8Q96PV6 779 aaPredicted RBP22.33■■□□□ 1.17
SRM-201ENST00000376957 MYOCQ99972 504 aa22.33■■□□□ 1.17
SRM-201ENST00000376957 C1QTNF2Q9BXJ5 285 aa22.33■■□□□ 1.17
SRM-201ENST00000376957 SCUBE2Q9NQ36 999 aa22.33■■□□□ 1.17
SRM-201ENST00000376957 ETNK2Q9NVF9 386 aa22.33■■□□□ 1.17
SRM-201ENST00000376957 ANGPTL2Q9UKU9 493 aa22.33■■□□□ 1.17
SRM-201ENST00000376957 PCOLCE2Q9UKZ9 415 aa22.33■■□□□ 1.17
SRM-201ENST00000376957 APOBEC2Q9Y235 224 aaKnown RBP22.33■■□□□ 1.17
SRM-201ENST00000376957 TRPM6Q9BX84 2022 aa22.33■■□□□ 1.16
SRM-201ENST00000376957 IGLON5A6NGN9 336 aa22.32■■□□□ 1.16
SRM-201ENST00000376957 ZNF487B1APH4 448 aa22.32■■□□□ 1.16
SRM-201ENST00000376957 AREL1O15033 823 aa22.32■■□□□ 1.16
SRM-201ENST00000376957 INSIG1O15503 277 aa22.32■■□□□ 1.16
SRM-201ENST00000376957 PIGNO95427 931 aa22.32■■□□□ 1.16
SRM-201ENST00000376957 LCA5LO95447 670 aa22.32■■□□□ 1.16
SRM-201ENST00000376957 CD48P09326 243 aa22.32■■□□□ 1.16
SRM-201ENST00000376957 ZFXP17010 805 aaPredicted RBP22.32■■□□□ 1.16
SRM-201ENST00000376957 KDELR1P24390 212 aa22.32■■□□□ 1.16
SRM-201ENST00000376957 ABL2P42684 1182 aa22.32■■□□□ 1.16
SRM-201ENST00000376957 MMP13P45452 471 aa22.32■■□□□ 1.16
SRM-201ENST00000376957 ARSEP51690 589 aa22.32■■□□□ 1.16
SRM-201ENST00000376957 TAS2R40P59535 323 aa22.32■■□□□ 1.16
SRM-201ENST00000376957 SLC10A7Q0GE19 358 aa22.32■■□□□ 1.16
SRM-201ENST00000376957 IFI16Q16666 785 aaKnown RBP22.32■■□□□ 1.16
SRM-201ENST00000376957 ATP13A4Q4VNC1 1196 aa22.32■■□□□ 1.16
SRM-201ENST00000376957 HS1BP3Q53T59 392 aa22.32■■□□□ 1.16
SRM-201ENST00000376957 CAMK1DQ8IU85 385 aa22.32■■□□□ 1.16
SRM-201ENST00000376957 TXLNBQ8N3L3 684 aa22.32■■□□□ 1.16
SRM-201ENST00000376957 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.32■■□□□ 1.16
SRM-201ENST00000376957 PCDHA13Q9Y5I0 950 aa22.32■■□□□ 1.16
SRM-201ENST00000376957 TMEM131Q92545 1883 aa22.31■■□□□ 1.16
SRM-201ENST00000376957 TOR1BO14657 336 aa22.31■■□□□ 1.16
SRM-201ENST00000376957 KRT10P13645 584 aa22.31■■□□□ 1.16
SRM-201ENST00000376957 TIMP2P16035 220 aa22.31■■□□□ 1.16
SRM-201ENST00000376957 CES1P23141 567 aa22.31■■□□□ 1.16
SRM-201ENST00000376957 GARSP41250 739 aaKnown RBP22.31■■□□□ 1.16
SRM-201ENST00000376957 RABIFP47224 123 aa22.31■■□□□ 1.16
SRM-201ENST00000376957 RXRGP48443 463 aa22.31■■□□□ 1.16
SRM-201ENST00000376957 PTAR1Q7Z6K3 402 aaPredicted RBP22.31■■□□□ 1.16
SRM-201ENST00000376957 NDUFAF2Q8N183 169 aa22.31■■□□□ 1.16
SRM-201ENST00000376957 PCDH19Q8TAB3 1148 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms