RNA–Protein interactions for RNA: ENST00000376569.7

DDR1-226, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,783 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-226ENST00000376569 ZNF534Q76KX8 674 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 ASRGL1Q7L266 308 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 ZNF598Q86UK7 904 aaKnown RBP12.79□□□□□ -0.36
DDR1-226ENST00000376569 CNTD1Q8N815 330 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 PTGR2Q8N8N7 351 aaPredicted RBP12.79□□□□□ -0.36
DDR1-226ENST00000376569 CDH19Q9H159 772 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 VRTNQ9H8Y1 702 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 FBRSL1Q9HCM7 1045 aaKnown RBP12.79□□□□□ -0.36
DDR1-226ENST00000376569 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.79□□□□□ -0.363e-12■■■■□ 22.7
DDR1-226ENST00000376569 VPS28Q9UK41 221 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 DERAQ9Y315 318 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 ARL5AQ9Y689 179 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 SSC5DA1L4H1 1573 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 HAPLN1P10915 354 aaPredicted RBP12.79□□□□□ -0.36
DDR1-226ENST00000376569 WARSP23381 471 aaKnown RBP12.79□□□□□ -0.36
DDR1-226ENST00000376569 PLD1Q13393 1074 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 CACUL1Q86Y37 369 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 DNAJB14Q8TBM8 379 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 MTFMTQ96DP5 389 aaKnown RBP12.79□□□□□ -0.36
DDR1-226ENST00000376569 DNAJC1Q96KC8 554 aaKnown RBP12.79□□□□□ -0.36
DDR1-226ENST00000376569 UBE2OQ9C0C9 1292 aaKnown RBP12.79□□□□□ -0.36
DDR1-226ENST00000376569 UPF3AQ9H1J1 476 aaKnown RBP12.79□□□□□ -0.36
DDR1-226ENST00000376569 CCSER2Q9H7U1 834 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 BRCA2P51587 3418 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 BTN3A1O00481 513 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 GNGT2O14610 69 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 OR1D2P34982 312 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 CCDC15Q0P6D6 951 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 PRKAA1Q13131 559 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 DDX39BQ13838 428 aaKnown RBP12.79□□□□□ -0.36
DDR1-226ENST00000376569 LRRC73Q5JTD7 316 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 RARS2Q5T160 578 aaKnown RBP12.79□□□□□ -0.36
DDR1-226ENST00000376569 DBF4BQ8NFT6 615 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 ARNTL2Q8WYA1 636 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 NCLNQ969V3 563 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 SUN2Q9UH99 717 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 ZNF180Q9UJW8 692 aa12.79□□□□□ -0.36
DDR1-226ENST00000376569 ARHGEF37A1IGU5 675 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 LRRC14BA6NHZ5 514 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 MGEA5O60502 916 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 DNAJA2O60884 412 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 MPOP05164 745 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 CKMP06732 381 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 CD68P34810 354 aaPredicted RBP12.78□□□□□ -0.36
DDR1-226ENST00000376569 GGT5P36269 586 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 ECT2LQ008S8 904 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 CAPRIN1Q14444 709 aaKnown RBP12.78□□□□□ -0.36
DDR1-226ENST00000376569 MBLAC2Q68D91 279 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 MAMDC4Q6UXC1 1216 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 ANGPTL8Q6UXH0 198 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 OR6Y1Q8NGX8 325 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 AUTS2Q8WXX7 1259 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 SERPINB11Q96P15 392 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 MRPL46Q9H2W6 279 aaKnown RBP12.78□□□□□ -0.36
DDR1-226ENST00000376569 PTGDR2Q9Y5Y4 395 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 PHIPQ8WWQ0 1821 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 HMX2A2RU54 273 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 FAM149AA5PLN7 773 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 AXIN1O15169 862 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 TM7SF2O76062 418 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 SERPINF2P08697 491 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 MRPS35P82673 323 aaKnown RBP12.78□□□□□ -0.36
DDR1-226ENST00000376569 ARCQ7LC44 396 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 CYGBQ8WWM9 190 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 ULK4Q96C45 1275 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 RHOJQ9H4E5 214 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 GDAP2Q9NXN4 497 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 EURLQ9NYK6 297 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 CLIC5Q9NZA1 410 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 BCAP29Q9UHQ4 241 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 SLC30A1Q9Y6M5 507 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 LAMA2P24043 3122 aaKnown RBP12.78□□□□□ -0.36
DDR1-226ENST00000376569 TRIP12Q14669 1992 aaPredicted RBP12.78□□□□□ -0.36
DDR1-226ENST00000376569 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.78□□□□□ -0.36
DDR1-226ENST00000376569 MANSC4A6NHS7 340 aaPredicted RBP12.78□□□□□ -0.36
DDR1-226ENST00000376569 ZNF865P0CJ78 1059 aaPredicted RBP12.78□□□□□ -0.36
DDR1-226ENST00000376569 ZNF177Q13360 481 aaPredicted RBP12.78□□□□□ -0.36
DDR1-226ENST00000376569 PTPRRQ15256 657 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 PTRHD1Q6GMV3 140 aaKnown RBP12.78□□□□□ -0.36
DDR1-226ENST00000376569 MARK2Q7KZI7 788 aaKnown RBP12.78□□□□□ -0.36
DDR1-226ENST00000376569 CEP97Q8IW35 865 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 ZNF398Q8TD17 642 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 SKA1Q96BD8 255 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 DDX18Q9NVP1 670 aaKnown RBP12.78□□□□□ -0.36
DDR1-226ENST00000376569 CDH22Q9UJ99 828 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 LRCH1Q9Y2L9 728 aa12.78□□□□□ -0.36
DDR1-226ENST00000376569 TYW5A2RUC4 315 aaKnown RBP12.77□□□□□ -0.36
DDR1-226ENST00000376569 MBL2P11226 248 aaPredicted RBP12.77□□□□□ -0.36
DDR1-226ENST00000376569 ATP6V1C1P21283 382 aa12.77□□□□□ -0.36
DDR1-226ENST00000376569 PPM1FP49593 454 aaPredicted RBP12.77□□□□□ -0.36
DDR1-226ENST00000376569 NFE2Q16621 373 aaPredicted RBP12.77□□□□□ -0.36
DDR1-226ENST00000376569 PPP1R3AQ16821 1122 aa12.77□□□□□ -0.36
DDR1-226ENST00000376569 DCLRE1AQ6PJP8 1040 aa12.77□□□□□ -0.36
DDR1-226ENST00000376569 DDI1Q8WTU0 396 aa12.77□□□□□ -0.36
DDR1-226ENST00000376569 TRIB2Q92519 343 aa12.77□□□□□ -0.36
DDR1-226ENST00000376569 PRPF18Q99633 342 aaKnown RBP12.77□□□□□ -0.36
DDR1-226ENST00000376569 Q9H521 79 aa12.77□□□□□ -0.36
DDR1-226ENST00000376569 BATF3Q9NR55 127 aa12.77□□□□□ -0.36
DDR1-226ENST00000376569 NUP214P35658 2090 aaPredicted RBP12.77□□□□□ -0.36
DDR1-226ENST00000376569 LTBP1Q14766 1721 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms