RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 HLA-EP13747 358 aa23.16■■□□□ 1.3
HLA-C-202ENST00000376237 ADRA1AP35348 466 aa23.16■■□□□ 1.3
HLA-C-202ENST00000376237 CDK18Q07002 472 aa23.16■■□□□ 1.3
HLA-C-202ENST00000376237 IHHQ14623 411 aa23.16■■□□□ 1.3
HLA-C-202ENST00000376237 NAA30Q147X3 362 aaPredicted RBP23.16■■□□□ 1.3
HLA-C-202ENST00000376237 RANBP10Q6VN20 620 aa23.16■■□□□ 1.3
HLA-C-202ENST00000376237 CCNI2Q6ZMN8 369 aaPredicted RBP23.16■■□□□ 1.3
HLA-C-202ENST00000376237 DSG4Q86SJ6 1040 aa23.16■■□□□ 1.3
HLA-C-202ENST00000376237 SIX5Q8N196 739 aa23.16■■□□□ 1.3
HLA-C-202ENST00000376237 OR6K2Q8NGY2 324 aa23.16■■□□□ 1.3
HLA-C-202ENST00000376237 OR8D1Q8WZ84 308 aa23.16■■□□□ 1.3
HLA-C-202ENST00000376237 IFT43Q96FT9 208 aa23.16■■□□□ 1.3
HLA-C-202ENST00000376237 FEM1CQ96JP0 617 aa23.16■■□□□ 1.3
HLA-C-202ENST00000376237 GABRG3Q99928 467 aa23.16■■□□□ 1.3
HLA-C-202ENST00000376237 TDRD1Q9BXT4 1180 aaKnown RBP23.16■■□□□ 1.3
HLA-C-202ENST00000376237 OSBPL1AQ9BXW6 950 aa23.16■■□□□ 1.3
HLA-C-202ENST00000376237 XAB2Q9HCS7 855 aaKnown RBP23.16■■□□□ 1.3
HLA-C-202ENST00000376237 LTB4R2Q9NPC1 389 aa23.16■■□□□ 1.3
HLA-C-202ENST00000376237 RAB21Q9UL25 225 aa23.16■■□□□ 1.3
HLA-C-202ENST00000376237 RAI2Q9Y5P3 530 aa23.16■■□□□ 1.3
HLA-C-202ENST00000376237 LOC285095A0A1B0GVY8 99 aa23.15■■□□□ 1.3
HLA-C-202ENST00000376237 RNF40O75150 1001 aa23.15■■□□□ 1.3
HLA-C-202ENST00000376237 SIN3BO75182 1162 aa23.15■■□□□ 1.3
HLA-C-202ENST00000376237 CHRNB1P11230 501 aa23.15■■□□□ 1.3
HLA-C-202ENST00000376237 PCSK7Q16549 785 aa23.15■■□□□ 1.3
HLA-C-202ENST00000376237 SYCP2LQ5T4T6 812 aa23.15■■□□□ 1.3
HLA-C-202ENST00000376237 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.15■■□□□ 1.3
HLA-C-202ENST00000376237 ZNF366Q8N895 744 aa23.15■■□□□ 1.3
HLA-C-202ENST00000376237 NSMCE3Q96MG7 304 aa23.15■■□□□ 1.3
HLA-C-202ENST00000376237 TBL1YQ9BQ87 522 aa23.15■■□□□ 1.3
HLA-C-202ENST00000376237 ADGRE3Q9BY15 652 aa23.15■■□□□ 1.3
HLA-C-202ENST00000376237 ZDHHC6Q9H6R6 413 aa23.15■■□□□ 1.3
HLA-C-202ENST00000376237 ARNT2Q9HBZ2 717 aa23.15■■□□□ 1.3
HLA-C-202ENST00000376237 IL36AQ9UHA7 158 aa23.15■■□□□ 1.3
HLA-C-202ENST00000376237 NFU1Q9UMS0 254 aa23.15■■□□□ 1.3
HLA-C-202ENST00000376237 PCDHGC4Q9Y5F7 938 aa23.15■■□□□ 1.3
HLA-C-202ENST00000376237 MUC22E2RYF6 1773 aaPredicted RBP23.15■■□□□ 1.3
HLA-C-202ENST00000376237 MYO18AQ92614 2054 aaKnown RBP23.14■■□□□ 1.3
HLA-C-202ENST00000376237 SYNCRIPO60506 623 aaKnown RBP23.14■■□□□ 1.3
HLA-C-202ENST00000376237 PRNPP04156 253 aa23.14■■□□□ 1.3
HLA-C-202ENST00000376237 HLA-DPA1P20036 260 aa23.14■■□□□ 1.3
HLA-C-202ENST00000376237 VSNL1P62760 191 aa23.14■■□□□ 1.3
HLA-C-202ENST00000376237 CAMK2GQ13555 558 aaPredicted RBP23.14■■□□□ 1.3
HLA-C-202ENST00000376237 STARD3Q14849 445 aa23.14■■□□□ 1.3
HLA-C-202ENST00000376237 EOGTQ5NDL2 527 aa23.14■■□□□ 1.3
HLA-C-202ENST00000376237 LRRC8BQ6P9F7 803 aa23.14■■□□□ 1.3
HLA-C-202ENST00000376237 CEP128Q6ZU80 1094 aa23.14■■□□□ 1.3
HLA-C-202ENST00000376237 ZNF687Q8N1G0 1237 aa23.14■■□□□ 1.3
HLA-C-202ENST00000376237 ZCCHC9Q8N567 271 aaKnown RBP23.14■■□□□ 1.3
HLA-C-202ENST00000376237 CHST14Q8NCH0 376 aa23.14■■□□□ 1.3
HLA-C-202ENST00000376237 FMO2Q99518 471 aa23.14■■□□□ 1.3
HLA-C-202ENST00000376237 MTG2Q9H4K7 406 aa23.14■■□□□ 1.3
HLA-C-202ENST00000376237 FBRSQ9HAH7 460 aa23.14■■□□□ 1.3
HLA-C-202ENST00000376237 ANTXRLA6NF34 631 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 TRAFD1O14545 582 aaPredicted RBP23.13■■□□□ 1.29
HLA-C-202ENST00000376237 HTRA2O43464 458 aaPredicted RBP23.13■■□□□ 1.29
HLA-C-202ENST00000376237 PPFIA2O75334 1257 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 KLF8O95600 359 aaPredicted RBP23.13■■□□□ 1.29
HLA-C-202ENST00000376237 NDST3O95803 873 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 TARSP26639 723 aaKnown RBP23.13■■□□□ 1.29
HLA-C-202ENST00000376237 RPL26P61254 145 aaKnown RBP23.13■■□□□ 1.29
HLA-C-202ENST00000376237 ZXDAP98168 799 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 CDH17Q12864 832 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 SPARCL1Q14515 664 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 ARMC12Q5T9G4 340 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 GDPD4Q6W3E5 623 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 CAMK1DQ8IU85 385 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 PDIK1LQ8N165 341 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 TMIEQ8NEW7 156 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 HCAR2Q8TDS4 363 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 SPOCK2Q92563 424 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 SERPINB12Q96P63 405 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 FICDQ9BVA6 458 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 OSBPL6Q9BZF3 934 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 PHACTR1Q9C0D0 580 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 SUV39H2Q9H5I1 410 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 ZDHHC4Q9NPG8 344 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 CASS4Q9NQ75 786 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 PRSS16Q9NQE7 514 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 RPL26L1Q9UNX3 145 aaKnown RBP23.13■■□□□ 1.29
HLA-C-202ENST00000376237 WASF2Q9Y6W5 498 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 TCF20Q9UGU0 1960 aaKnown RBP23.13■■□□□ 1.29
HLA-C-202ENST00000376237 GOLGA8MH3BSY2 632 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 FZD6O60353 706 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 AGTP01019 485 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 ECHS1P30084 290 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 GKP32189 559 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 WASP42768 502 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 ARL4CP56559 192 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 TRAF2Q12933 501 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 CBLBQ13191 982 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 UBXN2BQ14CS0 331 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 SLC1A5Q15758 541 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 STK40Q8N2I9 435 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 DNAAF3Q8N9W5 541 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 TXNDC5Q8NBS9 432 aaKnown RBP23.13■■□□□ 1.29
HLA-C-202ENST00000376237 RPLP0P6Q8NHW5 317 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 VOPP1Q96AW1 172 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 TRIB3Q96RU7 358 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 LMAN1LQ9HAT1 526 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms