RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 TTC24A2A3L6 582 aaPredicted RBP11.48□□□□□ -0.57
HSPG2-202ENST00000374676 C5orf60A6NFR6 353 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 C16orf96A6NNT2 1141 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 KIF2AO00139 706 aaPredicted RBP11.48□□□□□ -0.57
HSPG2-202ENST00000374676 TRAFD1O14545 582 aaPredicted RBP11.48□□□□□ -0.57
HSPG2-202ENST00000374676 ZNF185O15231 689 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 KCNN4O15554 427 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 SOCS5O75159 536 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 GJB3O75712 270 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 RNASEH2AO75792 299 aaKnown RBP11.48□□□□□ -0.57
HSPG2-202ENST00000374676 RPP40O75818 363 aaKnown RBP11.48□□□□□ -0.57
HSPG2-202ENST00000374676 STK10O94804 968 aaKnown RBP11.48□□□□□ -0.57
HSPG2-202ENST00000374676 ITGAVP06756 1048 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 SERPINF2P08697 491 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 CD6P30203 668 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 CD68P34810 354 aaPredicted RBP11.48□□□□□ -0.57
HSPG2-202ENST00000374676 METAP1P53582 386 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 DSC2Q02487 901 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 IHHQ14623 411 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 SPDYCQ5MJ68 293 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 PIP5KL1Q5T9C9 394 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 BRAT1Q6PJG6 821 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.48□□□□□ -0.57
HSPG2-202ENST00000374676 SYT10Q6XYQ8 523 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 PID1Q7Z2X4 250 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 CREG2Q8IUH2 290 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 C12orf50Q8NA57 414 aaPredicted RBP11.48□□□□□ -0.57
HSPG2-202ENST00000374676 GANCQ8TET4 914 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 ATG4AQ8WYN0 398 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 RAB7BQ96AH8 199 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 RTP4Q96DX8 246 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 IMP4Q96G21 291 aaKnown RBP11.48□□□□□ -0.57
HSPG2-202ENST00000374676 TOE1Q96GM8 510 aaKnown RBP11.48□□□□□ -0.57
HSPG2-202ENST00000374676 ZC3H10Q96K80 434 aaKnown RBP11.48□□□□□ -0.57
HSPG2-202ENST00000374676 SPACA7Q96KW9 195 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 FCRL5Q96RD9 977 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 CEP41Q9BYV8 373 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 BTBD1Q9H0C5 482 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 NEUROG2Q9H2A3 272 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 KDM4CQ9H3R0 1056 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 CD93Q9NPY3 652 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 KLHL8Q9P2G9 620 aaPredicted RBP11.48□□□□□ -0.57
HSPG2-202ENST00000374676 SERGEFQ9UGK8 458 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 MBD1Q9UIS9 605 aaPredicted RBP11.48□□□□□ -0.57
HSPG2-202ENST00000374676 HCN4Q9Y3Q4 1203 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 ARIH1Q9Y4X5 557 aaPredicted RBP11.48□□□□□ -0.57
HSPG2-202ENST00000374676 PI4KAP42356 2102 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 EP300Q09472 2414 aaPredicted RBP11.48□□□□□ -0.57
HSPG2-202ENST00000374676 ZFHX2Q9C0A1 2572 aaPredicted RBP11.48□□□□□ -0.57
HSPG2-202ENST00000374676 OTOGLQ3ZCN5 2332 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 C10orf142B7Z368 130 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 FZD6O60353 706 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 OPHN1O60890 802 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 GCATO75600 419 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 PIGNO95427 931 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 MMP2P08253 660 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 TIMP2P16035 220 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 ACSL1P33121 698 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 NEK3P51956 506 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 POLR2LP62875 67 aaKnown RBP11.47□□□□□ -0.57
HSPG2-202ENST00000374676 SKOR1P84550 965 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 CYP1B1Q16678 543 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 POM121L1PQ3SYA9 428 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 ANKRD20A2Q5SQ80 823 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 ANKRD20A1Q5TYW2 823 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 AGBL4Q5VU57 503 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 ANKRD20A3Q5VUR7 823 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 ITPRIPL1Q6GPH6 555 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 FBXL19Q6PCT2 694 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 PARS2Q7L3T8 475 aaKnown RBP11.47□□□□□ -0.57
HSPG2-202ENST00000374676 PRPF39Q86UA1 669 aaKnown RBP11.47□□□□□ -0.57
HSPG2-202ENST00000374676 ZSCAN30Q86W11 494 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 FAM160A2Q8N612 972 aaPredicted RBP11.47□□□□□ -0.57
HSPG2-202ENST00000374676 FRMD1Q8N878 549 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 FAM71DQ8N9W8 422 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 ATOH1Q92858 354 aaPredicted RBP11.47□□□□□ -0.57
HSPG2-202ENST00000374676 TADA1Q96BN2 335 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 C16orf45Q96MC5 204 aaPredicted RBP11.47□□□□□ -0.57
HSPG2-202ENST00000374676 SPATA13Q96N96 652 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 TMEM121Q9BTD3 319 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 PCED1AQ9H1Q7 454 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 SEMA4AQ9H3S1 761 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 VPS45Q9NRW7 570 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 ZNF148Q9UQR1 794 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 INVSQ9Y283 1065 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 TTLL3Q9Y4R7 772 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 PCDHGC4Q9Y5F7 938 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 RAI2Q9Y5P3 530 aa11.47□□□□□ -0.57
HSPG2-202ENST00000374676 CACNA1EQ15878 2313 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 LRRC72A6NJI9 287 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 PLK4O00444 970 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 AREL1O15033 823 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 MAP3K13O43283 966 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 PLRG1O43660 514 aaKnown RBP11.46□□□□□ -0.57
HSPG2-202ENST00000374676 AP1G1O43747 822 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 NDUFS2O75306 463 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 SEMA4FO95754 770 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 ADRB3P13945 408 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 NFKB1P19838 968 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 BCKDHBP21953 392 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms