RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 CFAP58Q5T655 872 aa16.16■□□□□ 0.18
HDHD3-202ENST00000374180 AADACL2Q6P093 401 aa16.16■□□□□ 0.18
HDHD3-202ENST00000374180 PARS2Q7L3T8 475 aaKnown RBP16.16■□□□□ 0.18
HDHD3-202ENST00000374180 CAMK1DQ8IU85 385 aa16.16■□□□□ 0.18
HDHD3-202ENST00000374180 GPR161Q8N6U8 529 aaKnown RBP16.16■□□□□ 0.18
HDHD3-202ENST00000374180 PAF1Q8N7H5 531 aa16.16■□□□□ 0.18
HDHD3-202ENST00000374180 HCAR2Q8TDS4 363 aa16.16■□□□□ 0.18
HDHD3-202ENST00000374180 RAB7BQ96AH8 199 aa16.16■□□□□ 0.18
HDHD3-202ENST00000374180 NUDCD1Q96RS6 583 aa16.16■□□□□ 0.18
HDHD3-202ENST00000374180 MIR1-1HGQ9H1L0 117 aa16.16■□□□□ 0.18
HDHD3-202ENST00000374180 PREBQ9HCU5 417 aa16.16■□□□□ 0.18
HDHD3-202ENST00000374180 VPS45Q9NRW7 570 aa16.16■□□□□ 0.18
HDHD3-202ENST00000374180 SEMA4GQ9NTN9 838 aa16.16■□□□□ 0.18
HDHD3-202ENST00000374180 DKK3Q9UBP4 350 aa16.16■□□□□ 0.18
HDHD3-202ENST00000374180 AMACRQ9UHK6 382 aa16.16■□□□□ 0.18
HDHD3-202ENST00000374180 EIF2B4Q9UI10 523 aaKnown RBP16.16■□□□□ 0.18
HDHD3-202ENST00000374180 TTLL3Q9Y4R7 772 aa16.16■□□□□ 0.18
HDHD3-202ENST00000374180 SHROOM3Q8TF72 1996 aa16.16■□□□□ 0.18
HDHD3-202ENST00000374180 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.15■□□□□ 0.18
HDHD3-202ENST00000374180 APOC4-APOC2K7ER74 178 aa16.15■□□□□ 0.18
HDHD3-202ENST00000374180 GJB3O75712 270 aa16.15■□□□□ 0.18
HDHD3-202ENST00000374180 PCDH8O95206 1070 aa16.15■□□□□ 0.18
HDHD3-202ENST00000374180 APOC2P02655 101 aa16.15■□□□□ 0.18
HDHD3-202ENST00000374180 IGHV4-34P06331 123 aa16.15■□□□□ 0.18
HDHD3-202ENST00000374180 ZNF806P0C7X5 589 aa16.15■□□□□ 0.18
HDHD3-202ENST00000374180 GNSP15586 552 aa16.15■□□□□ 0.18
HDHD3-202ENST00000374180 CR2P20023 1033 aa16.15■□□□□ 0.18
HDHD3-202ENST00000374180 HOXD12P35452 270 aa16.15■□□□□ 0.18
HDHD3-202ENST00000374180 CCR5P51681 352 aa16.15■□□□□ 0.18
HDHD3-202ENST00000374180 RPS6KA1Q15418 735 aa16.15■□□□□ 0.18
HDHD3-202ENST00000374180 RALGPS1Q5JS13 557 aa16.15■□□□□ 0.18
HDHD3-202ENST00000374180 PLA2G2CQ5R387 149 aa16.15■□□□□ 0.18
HDHD3-202ENST00000374180 MEI1Q5TIA1 1274 aa16.15■□□□□ 0.18
HDHD3-202ENST00000374180 NEK5Q6P3R8 708 aa16.15■□□□□ 0.18
HDHD3-202ENST00000374180 B4GALNT4Q76KP1 1039 aa16.15■□□□□ 0.18
HDHD3-202ENST00000374180 ZC3H18Q86VM9 953 aaKnown RBP16.15■□□□□ 0.18
HDHD3-202ENST00000374180 TFB1MQ8WVM0 346 aaKnown RBP16.15■□□□□ 0.18
HDHD3-202ENST00000374180 HERPUD2Q9BSE4 406 aa16.15■□□□□ 0.18
HDHD3-202ENST00000374180 POLR1EQ9GZS1 481 aaKnown RBP16.15■□□□□ 0.18
HDHD3-202ENST00000374180 SMOC1Q9H4F8 434 aa16.15■□□□□ 0.18
HDHD3-202ENST00000374180 NOD2Q9HC29 1040 aa16.15■□□□□ 0.18
HDHD3-202ENST00000374180 SEPT10Q9P0V9 454 aa16.15■□□□□ 0.18
HDHD3-202ENST00000374180 TPX2Q9ULW0 747 aaKnown RBP16.15■□□□□ 0.18
HDHD3-202ENST00000374180 CFAP54Q96N23 3096 aa16.15■□□□□ 0.18
HDHD3-202ENST00000374180 CEP192Q8TEP8 1941 aa16.15■□□□□ 0.18
HDHD3-202ENST00000374180 ATXN2Q99700 1313 aaKnown RBP16.15■□□□□ 0.18
HDHD3-202ENST00000374180 NEMP1O14524 444 aa16.14■□□□□ 0.17
HDHD3-202ENST00000374180 TIMP2P16035 220 aa16.14■□□□□ 0.17
HDHD3-202ENST00000374180 TGM1P22735 817 aa16.14■□□□□ 0.17
HDHD3-202ENST00000374180 XPAP23025 273 aaPredicted RBP16.14■□□□□ 0.17
HDHD3-202ENST00000374180 CES1P23141 567 aa16.14■□□□□ 0.17
HDHD3-202ENST00000374180 IFI35P80217 286 aaPredicted RBP16.14■□□□□ 0.17
HDHD3-202ENST00000374180 CSRP2Q16527 193 aa16.14■□□□□ 0.17
HDHD3-202ENST00000374180 PEAR1Q5VY43 1037 aaPredicted RBP16.14■□□□□ 0.17
HDHD3-202ENST00000374180 BRAT1Q6PJG6 821 aa16.14■□□□□ 0.17
HDHD3-202ENST00000374180 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.14■□□□□ 0.17
HDHD3-202ENST00000374180 CEP76Q8TAP6 659 aa16.14■□□□□ 0.17
HDHD3-202ENST00000374180 IL12RB2Q99665 862 aa16.14■□□□□ 0.17
HDHD3-202ENST00000374180 SEMA3CQ99985 751 aa16.14■□□□□ 0.17
HDHD3-202ENST00000374180 PARD6AQ9NPB6 346 aa16.14■□□□□ 0.17
HDHD3-202ENST00000374180 SUSD2Q9UGT4 822 aa16.14■□□□□ 0.17
HDHD3-202ENST00000374180 PCDHGC4Q9Y5F7 938 aa16.14■□□□□ 0.17
HDHD3-202ENST00000374180 FADS3Q9Y5Q0 445 aa16.14■□□□□ 0.17
HDHD3-202ENST00000374180 RALGAPA1Q6GYQ0 2036 aa16.13■□□□□ 0.17
HDHD3-202ENST00000374180 AP1G1O43747 822 aa16.13■□□□□ 0.17
HDHD3-202ENST00000374180 RNGTTO60942 597 aaKnown RBP16.13■□□□□ 0.17
HDHD3-202ENST00000374180 CD27P26842 260 aa16.13■□□□□ 0.17
HDHD3-202ENST00000374180 MAT2AP31153 395 aaKnown RBP16.13■□□□□ 0.17
HDHD3-202ENST00000374180 ABL2P42684 1182 aa16.13■□□□□ 0.17
HDHD3-202ENST00000374180 PPP2CBP62714 309 aa16.13■□□□□ 0.17
HDHD3-202ENST00000374180 POLR2LP62875 67 aaKnown RBP16.13■□□□□ 0.17
HDHD3-202ENST00000374180 PPP2CAP67775 309 aa16.13■□□□□ 0.17
HDHD3-202ENST00000374180 PRKD1Q15139 912 aaPredicted RBP16.13■□□□□ 0.17
HDHD3-202ENST00000374180 DUOXA1Q1HG43 343 aa16.13■□□□□ 0.17
HDHD3-202ENST00000374180 RABEPKQ7Z6M1 372 aa16.13■□□□□ 0.17
HDHD3-202ENST00000374180 PRPF39Q86UA1 669 aaKnown RBP16.13■□□□□ 0.17
HDHD3-202ENST00000374180 TRIM69Q86WT6 500 aa16.13■□□□□ 0.17
HDHD3-202ENST00000374180 REXO1L1PQ8IX06 675 aa16.13■□□□□ 0.17
HDHD3-202ENST00000374180 FEM1CQ96JP0 617 aa16.13■□□□□ 0.17
HDHD3-202ENST00000374180 NSMCE3Q96MG7 304 aa16.13■□□□□ 0.17
HDHD3-202ENST00000374180 TRMT1Q9NXH9 659 aaKnown RBP16.13■□□□□ 0.17
HDHD3-202ENST00000374180 ATP8A1Q9Y2Q0 1164 aa16.13■□□□□ 0.17
HDHD3-202ENST00000374180 A0A1W2PPC4 97 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 A0A1W2PQU0 124 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 TSPAN11A1L157 253 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 GOLGA6L9A6NEM1 432 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 HACD1B0YJ81 288 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 PATE3B3GLJ2 98 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 C10orf142B7Z368 130 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 H7C0C1 242 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 TRAFD1O14545 582 aaPredicted RBP16.12■□□□□ 0.17
HDHD3-202ENST00000374180 KHNYNO15037 678 aaKnown RBP16.12■□□□□ 0.17
HDHD3-202ENST00000374180 MTSS1O43312 755 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 LATO43561 262 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 TSPAN6O43657 245 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 FOXD2O60548 495 aaPredicted RBP16.12■□□□□ 0.17
HDHD3-202ENST00000374180 SOCS5O75159 536 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 CFIP05156 583 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 HLA-DQB2P05538 268 aa16.12■□□□□ 0.17
HDHD3-202ENST00000374180 ATP5OP48047 213 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms