RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 WLSQ5T9L3 541 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 ICE2Q659A1 982 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 RAPH1Q70E73 1250 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 C14orf80Q86SX3 495 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 ARID3BQ8IVW6 561 aaPredicted RBP8.8□□□□□ -1
SNRNP40-202ENST00000373720 ENDOVQ8N8Q3 282 aaKnown RBP8.8□□□□□ -1
SNRNP40-202ENST00000373720 IPMKQ8NFU5 416 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 RHEBL1Q8TAI7 183 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 HASPINQ8TF76 798 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 MCUR1Q96AQ8 359 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 MFSD3Q96ES6 412 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 PTCD3Q96EY7 689 aaKnown RBP8.8□□□□□ -1
SNRNP40-202ENST00000373720 IGSF21Q96ID5 467 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 CELF6Q96J87 481 aaKnown RBP8.8□□□□□ -1
SNRNP40-202ENST00000373720 RILPQ96NA2 401 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 ZNF558Q96NG5 402 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 KLF6Q99612 283 aaPredicted RBP8.8□□□□□ -1
SNRNP40-202ENST00000373720 TTC1Q99614 292 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 MGME1Q9BQP7 344 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 FICDQ9BVA6 458 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 TBC1D10AQ9BXI6 508 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 ACE2Q9BYF1 805 aaPredicted RBP8.8□□□□□ -1
SNRNP40-202ENST00000373720 GPR62Q9BZJ7 368 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 NOD2Q9HC29 1040 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 TMPRSS4Q9NRS4 437 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 IARS2Q9NSE4 1012 aaKnown RBP8.8□□□□□ -1
SNRNP40-202ENST00000373720 ZNF212Q9UDV6 495 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 FBXO5Q9UKT4 447 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 ZNF840PA6NDX5 716 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 C2orf81A6NN90 581 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 TBKBP1A7MCY6 615 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 CAPN14A8MX76 684 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 FOXO6A8MYZ6 492 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 ANKRD65E5RJM6 399 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 FCHO1O14526 889 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 HDAC3O15379 428 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 AOC2O75106 756 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 LUC7L3O95232 432 aaKnown RBP8.79□□□□□ -1
SNRNP40-202ENST00000373720 VAPBO95292 243 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 HSPA4LO95757 839 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 GLP2RO95838 553 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 AHSGP02765 367 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 T-ENOLP0DO92 83 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 THRAP10827 490 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 SERPINB3P29508 390 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 RPL14P50914 215 aaKnown RBP8.79□□□□□ -1
SNRNP40-202ENST00000373720 CLCN4P51793 760 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 ATP6V0D1P61421 351 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 PRAMEP78395 509 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 NFKB2Q00653 900 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 GNA12Q03113 381 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 HERC3Q15034 1050 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 MAPRE2Q15555 327 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 KCTD19Q17RG1 926 aaPredicted RBP8.79□□□□□ -1
SNRNP40-202ENST00000373720 SYCP2LQ5T4T6 812 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 ARTNQ5T4W7 220 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 FBXW10Q5XX13 1052 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 METTL2BQ6P1Q9 378 aaKnown RBP8.79□□□□□ -1
SNRNP40-202ENST00000373720 CERS6Q6ZMG9 384 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 SLC39A5Q6ZMH5 540 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 ACAD11Q709F0 780 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 OTOP3Q7RTS5 596 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 EFL1Q7Z2Z2 1120 aaKnown RBP8.79□□□□□ -1
SNRNP40-202ENST00000373720 DDX53Q86TM3 631 aaKnown RBP8.79□□□□□ -1
SNRNP40-202ENST00000373720 STK40Q8N2I9 435 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 EFHBQ8N7U6 833 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 ATAD1Q8NBU5 361 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 ZNF296Q8WUU4 475 aaPredicted RBP8.79□□□□□ -1
SNRNP40-202ENST00000373720 TOP1MTQ969P6 601 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 ACDQ96AP0 544 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 SLC7A6OSQ96CW6 309 aaPredicted RBP8.79□□□□□ -1
SNRNP40-202ENST00000373720 TMEM169Q96HH4 297 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 ZNF512Q96ME7 567 aaPredicted RBP8.79□□□□□ -1
SNRNP40-202ENST00000373720 SEPT5Q99719 369 aaPredicted RBP8.79□□□□□ -1
SNRNP40-202ENST00000373720 BEGAINQ9BUH8 593 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 RHOBTB2Q9BYZ6 727 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 TASP1Q9H6P5 420 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 NOL6Q9H6R4 1146 aaKnown RBP8.79□□□□□ -1
SNRNP40-202ENST00000373720 EBF2Q9HAK2 575 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 BATF3Q9NR55 127 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 TMEM216Q9P0N5 145 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 STOML1Q9UBI4 398 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 DCTN4Q9UJW0 460 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 EMCNQ9ULC0 261 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 STK38LQ9Y2H1 464 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 TTC3P53804 2025 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 UTRNP46939 3433 aa8.79□□□□□ -1
SNRNP40-202ENST00000373720 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.78□□□□□ -1
SNRNP40-202ENST00000373720 FAM95CA0A1B0GW59 222 aa8.78□□□□□ -1
SNRNP40-202ENST00000373720 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.78□□□□□ -1
SNRNP40-202ENST00000373720 TARM1B6A8C7 271 aa8.78□□□□□ -1
SNRNP40-202ENST00000373720 G3V2L1 256 aa8.78□□□□□ -1
SNRNP40-202ENST00000373720 H7C0S8 307 aa8.78□□□□□ -1
SNRNP40-202ENST00000373720 GSC2O15499 205 aa8.78□□□□□ -1
SNRNP40-202ENST00000373720 MSI1O43347 362 aaKnown RBP8.78□□□□□ -1
SNRNP40-202ENST00000373720 UGT1A9O60656 530 aa8.78□□□□□ -1
SNRNP40-202ENST00000373720 FKBP6O75344 327 aa8.78□□□□□ -1
SNRNP40-202ENST00000373720 VPS4BO75351 444 aa8.78□□□□□ -1
SNRNP40-202ENST00000373720 CIB2O75838 187 aa8.78□□□□□ -1
SNRNP40-202ENST00000373720 MOCS2O96007 188 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms