RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 SMAD3P84022 425 aaKnown RBP13.32□□□□□ -0.28
NCDN-203ENST00000373253 PAFAH1B3Q15102 231 aaKnown RBP13.32□□□□□ -0.28
NCDN-203ENST00000373253 RBBP7Q16576 425 aa13.32□□□□□ -0.28
NCDN-203ENST00000373253 ACSBG2Q5FVE4 666 aa13.32□□□□□ -0.28
NCDN-203ENST00000373253 PIK3R6Q5UE93 754 aa13.32□□□□□ -0.28
NCDN-203ENST00000373253 CAPRIN2Q6IMN6 1127 aaKnown RBP13.32□□□□□ -0.28
NCDN-203ENST00000373253 SLC7A6OSQ96CW6 309 aaPredicted RBP13.32□□□□□ -0.28
NCDN-203ENST00000373253 IGSF9Q9P2J2 1179 aa13.32□□□□□ -0.28
NCDN-203ENST00000373253 CIDEBQ9UHD4 219 aa13.32□□□□□ -0.28
NCDN-203ENST00000373253 AURKCQ9UQB9 309 aa13.32□□□□□ -0.28
NCDN-203ENST00000373253 STX16-NPEPL1H3BU86 382 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 ADAM12O43184 909 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 GPR39O43194 453 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 SNX2O60749 519 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 SIX3O95343 332 aaPredicted RBP13.31□□□□□ -0.28
NCDN-203ENST00000373253 GRK2P25098 689 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 CNTFP26441 200 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 GKP32189 559 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 PCLAFQ15004 111 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 RASIP1Q5U651 963 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 LRRC8EQ6NSJ5 796 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 FRA10AC1Q70Z53 315 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 RTN4RL1Q86UN2 441 aaPredicted RBP13.31□□□□□ -0.28
NCDN-203ENST00000373253 HEXDCQ8WVB3 486 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 TUBGCP3Q96CW5 907 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 OLFM3Q96PB7 478 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 LENG8Q96PV6 779 aaPredicted RBP13.31□□□□□ -0.28
NCDN-203ENST00000373253 LRMDAQ9H2I8 198 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 MOCS1Q9NZB8 636 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 RCOR3Q9P2K3 495 aaPredicted RBP13.31□□□□□ -0.28
NCDN-203ENST00000373253 ZFP37Q9Y6Q3 630 aaPredicted RBP13.31□□□□□ -0.28
NCDN-203ENST00000373253 SF3B1O75533 1304 aaKnown RBP eCLIP13.31□□□□□ -0.28
NCDN-203ENST00000373253 RLFQ13129 1914 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 A0A1W2PQ45 241 aaPredicted RBP13.31□□□□□ -0.28
NCDN-203ENST00000373253 A0A1W2PQY0 241 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 SNAP91O60641 907 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 ETV4P43268 484 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 MLLT6P55198 1093 aaPredicted RBP13.31□□□□□ -0.28
NCDN-203ENST00000373253 BTKQ06187 659 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 TMPRSS6Q8IU80 811 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 ANKLE1Q8NAG6 615 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 SPDYE1Q8NFV5 336 aaPredicted RBP13.31□□□□□ -0.28
NCDN-203ENST00000373253 OR4K2Q8NGD2 314 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 UTP4Q969X6 686 aaKnown RBP13.31□□□□□ -0.28
NCDN-203ENST00000373253 YME1L1Q96TA2 773 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 NPAS2Q99743 824 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 TTPALQ9BTX7 342 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 ENTPD7Q9NQZ7 604 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 KANSL3Q9P2N6 904 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 SRRDQ9UH36 339 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 SOX13Q9UN79 622 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 MTF2Q9Y483 593 aaPredicted RBP13.31□□□□□ -0.28
NCDN-203ENST00000373253 MATN3O15232 486 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 RAB10P61026 200 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 BFSP2Q13515 415 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 COL9A2Q14055 689 aaPredicted RBP13.31□□□□□ -0.28
NCDN-203ENST00000373253 ATXN7L2Q5T6C5 722 aaPredicted RBP13.31□□□□□ -0.28
NCDN-203ENST00000373253 RNF219Q5W0B1 726 aaPredicted RBP13.31□□□□□ -0.28
NCDN-203ENST00000373253 GLT6D1Q7Z4J2 308 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 CEP97Q8IW35 865 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 RTL3Q8N8U3 475 aaKnown RBP13.31□□□□□ -0.28
NCDN-203ENST00000373253 MAB21L3Q8N8X9 362 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 SHKBP1Q8TBC3 707 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 CMTM5Q96DZ9 223 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 NAF1Q96HR8 494 aaKnown RBP13.31□□□□□ -0.28
NCDN-203ENST00000373253 VAT1Q99536 393 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 SCUBE2Q9NQ36 999 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 CD274Q9NZQ7 290 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 MID2Q9UJV3 735 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 ZNF180Q9UJW8 692 aa13.31□□□□□ -0.28
NCDN-203ENST00000373253 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.3□□□□□ -0.28
NCDN-203ENST00000373253 KLHL2O95198 593 aa13.3□□□□□ -0.28
NCDN-203ENST00000373253 PIK3CGP48736 1102 aa13.3□□□□□ -0.28
NCDN-203ENST00000373253 POLE2P56282 527 aa13.3□□□□□ -0.28
NCDN-203ENST00000373253 RHOAP61586 193 aa13.3□□□□□ -0.28
NCDN-203ENST00000373253 AP2B1P63010 937 aa13.3□□□□□ -0.28
NCDN-203ENST00000373253 MRPS22P82650 360 aaKnown RBP13.3□□□□□ -0.28
NCDN-203ENST00000373253 PITRM1Q5JRX3 1037 aa13.3□□□□□ -0.28
NCDN-203ENST00000373253 IZUMO2Q6UXV1 221 aa13.3□□□□□ -0.28
NCDN-203ENST00000373253 ULK2Q8IYT8 1036 aa13.3□□□□□ -0.28
NCDN-203ENST00000373253 UBE2OQ9C0C9 1292 aaKnown RBP13.3□□□□□ -0.28
NCDN-203ENST00000373253 SMG9Q9H0W8 520 aaKnown RBP13.3□□□□□ -0.28
NCDN-203ENST00000373253 DCLRE1BQ9H816 532 aa13.3□□□□□ -0.28
NCDN-203ENST00000373253 CREBZFQ9NS37 354 aa13.3□□□□□ -0.28
NCDN-203ENST00000373253 HEATR9A2RTY3 570 aa13.3□□□□□ -0.28
NCDN-203ENST00000373253 ALDH1A1P00352 501 aa13.3□□□□□ -0.28
NCDN-203ENST00000373253 MLNP12872 115 aa13.3□□□□□ -0.28
NCDN-203ENST00000373253 FGFR3P22607 806 aa13.3□□□□□ -0.28
NCDN-203ENST00000373253 GALNT2Q10471 571 aa13.3□□□□□ -0.28
NCDN-203ENST00000373253 MS4A13Q5J8X5 152 aa13.3□□□□□ -0.28
NCDN-203ENST00000373253 ARMC12Q5T9G4 340 aa13.3□□□□□ -0.28
NCDN-203ENST00000373253 THEMIS2Q5TEJ8 643 aa13.3□□□□□ -0.28
NCDN-203ENST00000373253 AGAP9Q5VTM2 703 aa13.3□□□□□ -0.28
NCDN-203ENST00000373253 MARK2Q7KZI7 788 aaKnown RBP13.3□□□□□ -0.28
NCDN-203ENST00000373253 FBXO22Q8NEZ5 403 aa13.3□□□□□ -0.28
NCDN-203ENST00000373253 TRPC4APQ8TEL6 797 aa13.3□□□□□ -0.28
NCDN-203ENST00000373253 RCN3Q96D15 328 aa13.3□□□□□ -0.28
NCDN-203ENST00000373253 SLC9A7Q96T83 725 aa13.3□□□□□ -0.28
NCDN-203ENST00000373253 POLR1EQ9GZS1 481 aaKnown RBP13.3□□□□□ -0.28
NCDN-203ENST00000373253 RHOJQ9H4E5 214 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms