RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 TK2O00142 265 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 ARIH2O95376 493 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 SNAP29O95721 258 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 LSM8O95777 96 aaKnown RBP6.64□□□□□ -1.35
CHD6-203ENST00000373233 GRIK1P39086 918 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 HNF4AP41235 474 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 DUSP28Q4G0W2 176 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 RWDD4Q6NW29 188 aaKnown RBP6.64□□□□□ -1.35
CHD6-203ENST00000373233 CLYBLQ8N0X4 340 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 DNAJB3Q8WWF6 145 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 RPS6KL1Q9Y6S9 549 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 CAPN15O75808 1086 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 ABL1P00519 1130 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 SHBGP04278 402 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 AKR1A1P14550 325 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 HTR2BP41595 481 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 ORC1Q13415 861 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 VEPH1Q14D04 833 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 PGS1Q32NB8 556 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 MROH9Q5TGP6 573 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 TMEM214Q6NUQ4 689 aaKnown RBP6.64□□□□□ -1.35
CHD6-203ENST00000373233 SLC13A5Q86YT5 568 aaPredicted RBP6.64□□□□□ -1.35
CHD6-203ENST00000373233 BPIFB6Q8NFQ5 453 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 C12orf43Q96C57 262 aaKnown RBP6.64□□□□□ -1.35
CHD6-203ENST00000373233 SRPK1Q96SB4 655 aaKnown RBP6.64□□□□□ -1.35
CHD6-203ENST00000373233 BFARQ9NZS9 450 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 ICE1Q9Y2F5 2266 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 ORC5O43913 435 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 MYBPC1Q00872 1141 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 CAPSQ13938 189 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 PRAMEF19Q5SWL8 479 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 TDRD10Q5VZ19 366 aaKnown RBP6.64□□□□□ -1.35
CHD6-203ENST00000373233 CDCA2Q69YH5 1023 aaPredicted RBP6.64□□□□□ -1.35
CHD6-203ENST00000373233 RNF135Q8IUD6 432 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 TNIP3Q96KP6 325 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 RNF225M0QZC1 329 aaPredicted RBP6.64□□□□□ -1.35
CHD6-203ENST00000373233 PLD2O14939 933 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 MYL12BO14950 172 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 HOXC6P09630 235 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 NUDT17P0C025 328 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 CD97P48960 835 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 RGS7P49802 495 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 MSLNQ13421 630 aaPredicted RBP6.64□□□□□ -1.35
CHD6-203ENST00000373233 ZNF662Q6ZS27 426 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 DCUN1D1Q96GG9 259 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 BRD7Q9NPI1 651 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 CISHQ9NSE2 258 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 PCDH10Q9P2E7 1040 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 COL4A5P29400 1685 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 FAM95CA0A1B0GW59 222 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 AURKAO14965 403 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 PPM1BO75688 479 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 NFICP08651 508 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 PAEPP09466 180 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 LINGO3P0C6S8 592 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 ZNF37AP17032 561 aaPredicted RBP6.64□□□□□ -1.35
CHD6-203ENST00000373233 VCLP18206 1134 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 MAPKAPK2P49137 400 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 PPP3CAQ08209 521 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 PAGE2BQ5JRK9 111 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 CDC73Q6P1J9 531 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 C4orf22Q6V702 233 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 SPATA18Q8TC71 538 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 SEPHS2Q99611 448 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 OGDHLQ9ULD0 1010 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 HEY1Q9Y5J3 304 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 H0YJX3 145 aa6.63□□□□□ -1.35
CHD6-203ENST00000373233 PRMT3O60678 531 aa6.63□□□□□ -1.35
CHD6-203ENST00000373233 HNRNPH3P31942 346 aaKnown RBP6.63□□□□□ -1.35
CHD6-203ENST00000373233 ECT2LQ008S8 904 aa6.63□□□□□ -1.35
CHD6-203ENST00000373233 SPDYAQ5MJ70 313 aa6.63□□□□□ -1.35
CHD6-203ENST00000373233 ERI1Q8IV48 349 aaKnown RBP6.63□□□□□ -1.35
CHD6-203ENST00000373233 HELQQ8TDG4 1101 aa6.63□□□□□ -1.35
CHD6-203ENST00000373233 ZNF75CPQ92670 426 aaPredicted RBP6.63□□□□□ -1.35
CHD6-203ENST00000373233 CASS4Q9NQ75 786 aa6.63□□□□□ -1.35
CHD6-203ENST00000373233 XPO7Q9UIA9 1087 aaKnown RBP6.63□□□□□ -1.35
CHD6-203ENST00000373233 WASF2Q9Y6W5 498 aa6.63□□□□□ -1.35
CHD6-203ENST00000373233 OR14I1A6ND48 311 aa6.63□□□□□ -1.35
CHD6-203ENST00000373233 PDGFRBP09619 1106 aa6.63□□□□□ -1.35
CHD6-203ENST00000373233 PNPLA4P41247 253 aa6.63□□□□□ -1.35
CHD6-203ENST00000373233 SQLEQ14534 574 aa6.63□□□□□ -1.35
CHD6-203ENST00000373233 EFL1Q7Z2Z2 1120 aaKnown RBP6.63□□□□□ -1.35
CHD6-203ENST00000373233 MIER2Q8N344 545 aa6.63□□□□□ -1.35
CHD6-203ENST00000373233 TSPAN17Q96FV3 270 aa6.63□□□□□ -1.35
CHD6-203ENST00000373233 TRNT1Q96Q11 434 aaKnown RBP6.63□□□□□ -1.35
CHD6-203ENST00000373233 TCF12Q99081 682 aa6.63□□□□□ -1.35
CHD6-203ENST00000373233 GTPBP2Q9BX10 602 aaKnown RBP6.63□□□□□ -1.35
CHD6-203ENST00000373233 FRMD8P1Q9BZ68 369 aaPredicted RBP6.63□□□□□ -1.35
CHD6-203ENST00000373233 ST6GALNAC4Q9H4F1 302 aa6.63□□□□□ -1.35
CHD6-203ENST00000373233 KLHL1Q9NR64 748 aa6.63□□□□□ -1.35
CHD6-203ENST00000373233 COMMD9Q9P000 198 aa6.63□□□□□ -1.35
CHD6-203ENST00000373233 STOX2Q9P2F5 926 aaPredicted RBP6.63□□□□□ -1.35
CHD6-203ENST00000373233 UBQLN1Q9UMX0 589 aaKnown RBP6.63□□□□□ -1.35
CHD6-203ENST00000373233 ZMYM2Q9UBW7 1377 aa6.63□□□□□ -1.35
CHD6-203ENST00000373233 PTPRFP10586 1907 aa6.63□□□□□ -1.35
CHD6-203ENST00000373233 INPP4BO15327 924 aa6.63□□□□□ -1.35
CHD6-203ENST00000373233 GLRA4Q5JXX5 417 aa6.63□□□□□ -1.35
CHD6-203ENST00000373233 KIAA1841Q6NSI8 718 aa6.63□□□□□ -1.35
CHD6-203ENST00000373233 TMEM26Q6ZUK4 368 aa6.63□□□□□ -1.35
CHD6-203ENST00000373233 BRI3BPQ8WY22 251 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms