RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 NCKIPSDQ9NZQ3 722 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 EGFL7Q9UHF1 273 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 TRPC5OSA6NMA1 111 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 C19orf81C9J6K1 198 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 C9JVG2 144 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 MRASO14807 208 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 HSPA1AP0DMV8 641 aaKnown RBP13.82□□□□□ -0.2
USP49-201ENST00000373006 HSPA1BP0DMV9 641 aaKnown RBP13.82□□□□□ -0.2
USP49-201ENST00000373006 CYP2B6P20813 491 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 POU6F1Q14863 301 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 OTUD1Q5VV17 481 aaPredicted RBP13.82□□□□□ -0.2
USP49-201ENST00000373006 OTOP3Q7RTS5 596 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 PLPPR4Q7Z2D5 763 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 CROCCP3Q8IVE0 287 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 SULF1Q8IWU6 871 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 EXOC8Q8IYI6 725 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 PELI3Q8N2H9 469 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 TTC39CQ8N584 583 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 GABPB2Q8TAK5 448 aaPredicted RBP13.82□□□□□ -0.2
USP49-201ENST00000373006 PBXIP1Q96AQ6 731 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 TRIM8Q9BZR9 551 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 NAA50Q9GZZ1 169 aaKnown RBP13.82□□□□□ -0.2
USP49-201ENST00000373006 SNTG2Q9NY99 539 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 TRIM17Q9Y577 477 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 PHIPQ8WWQ0 1821 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 ZNF638Q14966 1978 aaKnown RBP13.82□□□□□ -0.2
USP49-201ENST00000373006 A0A1W2PPW3 197 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 TCRBV3S1A0A5B6 114 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 TMEM221A6NGB7 291 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 H0YJX3 145 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 BMP10O95393 424 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 C22orf31O95567 290 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 JCHAINP01591 159 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 CD247P20963 164 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 KCNA5P22460 613 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 EDNRBP24530 442 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 BCAT1P54687 386 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 TUBA4AP68366 448 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 PRPSAP1Q14558 356 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 KCTD11Q693B1 232 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 GADL1Q6ZQY3 521 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 HFE2Q6ZVN8 426 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 PIGZQ86VD9 579 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 OFCC1Q8IZS5 231 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 LZTR1Q8N653 840 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 SPATA22Q8NHS9 363 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 AFG1LQ8WV93 481 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 PHF21BQ96EK2 531 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 MAELQ96JY0 434 aaKnown RBP13.81□□□□□ -0.2
USP49-201ENST00000373006 RPL10LQ96L21 214 aaKnown RBP13.81□□□□□ -0.2
USP49-201ENST00000373006 C12orf42Q96LP6 360 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 GPR78Q96P69 363 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 TSPAN18Q96SJ8 248 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 EFHD1Q9BUP0 239 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 CXorf21Q9HAI6 301 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 IPO11Q9UI26 975 aaKnown RBP13.81□□□□□ -0.2
USP49-201ENST00000373006 ANKRD6Q9Y2G4 727 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 SNX10Q9Y5X0 201 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 LCTP09848 1927 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 NUP205Q92621 2012 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 RNF103-CHMP3A0A140T963 221 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 DYTNA2CJ06 578 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 TMEM247A6NEH6 219 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 CLDN5O00501 218 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 GSTT2P0CG29 244 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 GSTT2BP0CG30 244 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 PMS2P3Q13401 168 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 FGD3Q5JSP0 725 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 C16orf87Q6PH81 154 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 SAPCD2Q86UD0 394 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 HM13Q8TCT9 377 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 HEXDCQ8WVB3 486 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 CYGBQ8WWM9 190 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 CELF6Q96J87 481 aaKnown RBP13.81□□□□□ -0.2
USP49-201ENST00000373006 PDGFCQ9NRA1 345 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 A0A087WXM4 84 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 FAM95CA0A1B0GW59 222 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 I6L893 689 aaPredicted RBP13.81□□□□□ -0.2
USP49-201ENST00000373006 J3QRK9 145 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 DCLK1O15075 740 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 HBP1O60381 514 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 BEST1O76090 585 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 SNRPB2P08579 225 aaKnown RBP13.81□□□□□ -0.2
USP49-201ENST00000373006 STMN1P16949 149 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 ATP6V1B2P21281 511 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 LRPAP1P30533 357 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 GNL1P36915 607 aaPredicted RBP13.81□□□□□ -0.2
USP49-201ENST00000373006 CD151P48509 253 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 HK2P52789 917 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 RAB10P61026 200 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 BTG3Q14201 252 aaPredicted RBP13.81□□□□□ -0.2
USP49-201ENST00000373006 CSHL1Q14406 222 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 PAFAH1B3Q15102 231 aaKnown RBP13.81□□□□□ -0.2
USP49-201ENST00000373006 ZBED5Q49AG3 693 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 CLEC6AQ6EIG7 209 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 PPP4R4Q6NUP7 873 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 DHRS4L2Q6PKH6 230 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 SPPL2CQ8IUH8 684 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 FBXL8Q96CD0 374 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 FBXL20Q96IG2 436 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms