RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 ATP5F1P24539 256 aaPredicted RBP14.84□□□□□ -0.03
NDC1-201ENST00000371429 FBXW10Q5XX13 1052 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 GDF6Q6KF10 455 aaPredicted RBP14.84□□□□□ -0.03
NDC1-201ENST00000371429 CCDC81Q6ZN84 652 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 ADCK1Q86TW2 530 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 RNF168Q8IYW5 571 aaPredicted RBP14.84□□□□□ -0.03
NDC1-201ENST00000371429 OR14C36Q8NHC7 312 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 PGM2Q96G03 612 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 FERD3LQ96RJ6 166 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 PCDHGC3Q9UN70 934 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 ROBO1Q9Y6N7 1651 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 VGLL3A8MV65 326 aa14.83□□□□□ -0.03
NDC1-201ENST00000371429 CCR4P51679 360 aa14.83□□□□□ -0.03
NDC1-201ENST00000371429 TIGD5Q53EQ6 642 aa14.83□□□□□ -0.03
NDC1-201ENST00000371429 TTC33Q6PID6 262 aaPredicted RBP14.83□□□□□ -0.03
NDC1-201ENST00000371429 HEXDCQ8WVB3 486 aa14.83□□□□□ -0.03
NDC1-201ENST00000371429 URADA6NGE7 173 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 NRP1O14786 923 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 LMO2P25791 158 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 RPL14P50914 215 aaKnown RBP14.83□□□□□ -0.04
NDC1-201ENST00000371429 LINGO4Q6UY18 593 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 TMEM132CQ8N3T6 1108 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 FUBP3Q96I24 572 aaKnown RBP eCLIP14.83□□□□□ -0.045e-8■■■□□ 17.6
NDC1-201ENST00000371429 GMLQ99445 158 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 ARHGEF4Q9NR80 690 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 IMP3Q9NV31 184 aaKnown RBP14.83□□□□□ -0.04
NDC1-201ENST00000371429 TMCO1Q9UM00 188 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 SLC12A4Q9UP95 1085 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 SLC38A8A6NNN8 435 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 RAB10P61026 200 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 GNA12Q03113 381 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 CNKSR3Q6P9H4 555 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 KLHL35Q6PF15 583 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 PLEKHM3Q6ZWE6 761 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 FNIP1Q8TF40 1166 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 ZNF75CPQ92670 426 aaPredicted RBP14.83□□□□□ -0.04
NDC1-201ENST00000371429 CLIP3Q96DZ5 547 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 CYLDQ9NQC7 956 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 SYBUQ9NX95 663 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 USE1Q9NZ43 259 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 GULP1Q9UBP9 304 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 FAM220BPB1ANY3 271 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 ULK1O75385 1050 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 CDK14O94921 469 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 APOA1P02647 267 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 TBL3Q12788 808 aaKnown RBP14.83□□□□□ -0.04
NDC1-201ENST00000371429 ZNF398Q8TD17 642 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 FAIM2Q9BWQ8 316 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 YIPF3Q9GZM5 350 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 RAI2Q9Y5P3 530 aa14.83□□□□□ -0.04
NDC1-201ENST00000371429 FCHO1O14526 889 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 PABPC1P11940 636 aaKnown RBP14.82□□□□□ -0.04
NDC1-201ENST00000371429 HSPA13P48723 471 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 PRKAG1P54619 331 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 CDH4P55283 916 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 RCN1Q15293 331 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 TAC4Q86UU9 113 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 FAM228AQ86W67 206 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 ALG3Q92685 438 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 ATAD3AQ9NVI7 634 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 A0A0U1RQJ8 604 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 A0A1W2PQ67 120 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 C5orf60A6NFR6 353 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 FFAR3O14843 346 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 GPR42O15529 346 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 GCATO75600 419 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 ALADP13716 330 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 LBPP18428 481 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 S100A5P33763 92 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 HTR7P34969 479 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 KLC1Q07866 573 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 PRMT9Q6P2P2 845 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 PHYKPLQ8IUZ5 450 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 OR52K2Q8NGK3 314 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 SEPHS2Q99611 448 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 SLC39A8Q9C0K1 460 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 CLIC5Q9NZA1 410 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 RAB21Q9UL25 225 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 KCNU1A8MYU2 1149 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 LRCH4O75427 683 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 MLYCDO95822 493 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 CNPP09543 421 aaKnown RBP14.82□□□□□ -0.04
NDC1-201ENST00000371429 TSHRP16473 764 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 RAD23AP54725 363 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 GAD2Q05329 585 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 STK32AQ8WU08 396 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 CCT7Q99832 543 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 SIKE1Q9BRV8 207 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 RAD21L1Q9H4I0 556 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 PER2O15055 1255 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 ENO2P09104 434 aaPredicted RBP14.82□□□□□ -0.04
NDC1-201ENST00000371429 ATP6V0D1P61421 351 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 CAP1Q01518 475 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 UBE3AQ05086 875 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 NOMO1Q15155 1222 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 FAM98BQ52LJ0 330 aaKnown RBP14.82□□□□□ -0.04
NDC1-201ENST00000371429 XKR6Q5GH73 641 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 ZDHHC20Q5W0Z9 365 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 TPGS2Q68CL5 300 aa14.82□□□□□ -0.04
NDC1-201ENST00000371429 RPAINQ86UA6 219 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms