RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 FAM117BQ6P1L5 589 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 CMTR2Q8IYT2 770 aaKnown RBP9.75□□□□□ -0.85
LRRC40-201ENST00000370952 ANKRD52Q8NB46 1076 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 MAELQ96JY0 434 aaKnown RBP9.75□□□□□ -0.85
LRRC40-201ENST00000370952 CDT1Q9H211 546 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 FANCEQ9HB96 536 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 MRPL40Q9NQ50 206 aaKnown RBP9.75□□□□□ -0.85
LRRC40-201ENST00000370952 EIF2B3Q9NR50 452 aaKnown RBP9.75□□□□□ -0.85
LRRC40-201ENST00000370952 TMEM181Q9P2C4 612 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 TCAF1Q9Y4C2 921 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 DGKBQ9Y6T7 804 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 DHRS12A0PJE2 317 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 AQP9O43315 295 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 HCRTO43612 131 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 NRP2O60462 931 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 ESRRBO95718 433 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 PGK1P00558 417 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 TSPAN8P19075 237 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 JAK1P23458 1154 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 IDUAP35475 653 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 XRRA1Q6P2D8 792 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 ABRAXAS1Q6UWZ7 409 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 TMEM135Q86UB9 458 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 FAM35AQ86V20 835 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 TMCO5AQ8N6Q1 288 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 TXNDC5Q8NBS9 432 aaKnown RBP9.75□□□□□ -0.85
LRRC40-201ENST00000370952 MAGEE2Q8TD90 523 aaPredicted RBP9.75□□□□□ -0.85
LRRC40-201ENST00000370952 TRAPPC12Q8WVT3 735 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 TRUB1Q8WWH5 349 aaKnown RBP9.75□□□□□ -0.85
LRRC40-201ENST00000370952 NDRG1Q92597 394 aaKnown RBP9.75□□□□□ -0.85
LRRC40-201ENST00000370952 HPS1Q92902 700 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 NIFKQ9BYG3 293 aaKnown RBP9.75□□□□□ -0.85
LRRC40-201ENST00000370952 POMKQ9H5K3 350 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 RIC8BQ9NVN3 520 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 GIN1Q9NXP7 522 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 GPRC5DQ9NZD1 345 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 VPS51Q9UID3 782 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 V9GYQ6 96 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 TRPC5OSA6NMA1 111 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 A8MU76 341 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 TARM1B6A8C7 271 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 NME4O00746 187 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 LSM1O15116 133 aaKnown RBP9.74□□□□□ -0.85
LRRC40-201ENST00000370952 KDM1AO60341 852 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 SNAP29O95721 258 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 APOA4P06727 396 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 ELK4P28324 431 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 RCVRNP35243 200 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 PITX1P78337 314 aaPredicted RBP9.74□□□□□ -0.85
LRRC40-201ENST00000370952 CAPRIN1Q14444 709 aaKnown RBP9.74□□□□□ -0.85
LRRC40-201ENST00000370952 TARBP2Q15633 366 aaKnown RBP9.74□□□□□ -0.85
LRRC40-201ENST00000370952 CCDC80Q76M96 950 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 PIWIL3Q7Z3Z3 882 aaKnown RBP9.74□□□□□ -0.85
LRRC40-201ENST00000370952 NANOGNBQ7Z5D8 188 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 RETREG3Q86VR2 466 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 ZNF354CQ86Y25 554 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 CEP97Q8IW35 865 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 C7orf31Q8N865 590 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 SCAIQ8N9R8 606 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 SGCDQ92629 289 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 LPAR1Q92633 364 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 KCNN1Q92952 543 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 ITPKCQ96DU7 683 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 DUS3LQ96G46 650 aaKnown RBP9.74□□□□□ -0.85
LRRC40-201ENST00000370952 CDHR1Q96JP9 859 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 SLC45A3Q96JT2 553 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 MPHOSPH6Q99547 160 aaKnown RBP9.74□□□□□ -0.85
LRRC40-201ENST00000370952 HERC2P3Q9BVR0 1158 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 NT5C1AQ9BXI3 368 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 CCDC68Q9H2F9 335 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 MINDY3Q9H8M7 445 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 NANOGQ9H9S0 305 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 CCM2LQ9NUG4 571 aaPredicted RBP9.74□□□□□ -0.85
LRRC40-201ENST00000370952 IFT80Q9P2H3 777 aaPredicted RBP9.74□□□□□ -0.85
LRRC40-201ENST00000370952 USP3Q9Y6I4 520 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 TRIM64A6NGJ6 449 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 CLASP2O75122 1294 aaKnown RBP9.74□□□□□ -0.85
LRRC40-201ENST00000370952 MAFO75444 373 aaPredicted RBP9.74□□□□□ -0.85
LRRC40-201ENST00000370952 HSPA8P11142 646 aaKnown RBP9.74□□□□□ -0.85
LRRC40-201ENST00000370952 CHRM3P20309 590 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 FASP25445 335 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 OPRL1P41146 370 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 PTPN9P43378 593 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 HK2P52789 917 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 GJA9P57773 515 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 RPS3AP61247 264 aaKnown RBP9.74□□□□□ -0.85
LRRC40-201ENST00000370952 MPP1Q00013 466 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 CTBP1Q13363 440 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 SQLEQ14534 574 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 MAPRE2Q15555 327 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 BCL2A1Q16548 175 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 ZIK1Q3SY52 487 aaPredicted RBP9.74□□□□□ -0.85
LRRC40-201ENST00000370952 ZC3HC1Q86WB0 502 aaKnown RBP9.74□□□□□ -0.85
LRRC40-201ENST00000370952 IFNEQ86WN2 208 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 RNF135Q8IUD6 432 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 DENND6AQ8IWF6 608 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 DHRSXQ8N5I4 330 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 RDH11Q8TC12 318 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 SNX19Q92543 992 aa9.74□□□□□ -0.85
LRRC40-201ENST00000370952 SEPT8Q92599 483 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms