RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 PTCD2Q8WV60 388 aaKnown RBP24.13■■□□□ 1.45
SNX3-203ENST00000368979 TLCD1Q96CP7 247 aa24.13■■□□□ 1.45
SNX3-203ENST00000368979 FCRL3Q96P31 734 aaPredicted RBP24.13■■□□□ 1.45
SNX3-203ENST00000368979 MRM3Q9HC36 420 aaKnown RBP24.13■■□□□ 1.45
SNX3-203ENST00000368979 VPS18Q9P253 973 aa24.13■■□□□ 1.45
SNX3-203ENST00000368979 SLC27A6Q9Y2P4 619 aa24.13■■□□□ 1.45
SNX3-203ENST00000368979 FAM159BA6NKW6 160 aa24.12■■□□□ 1.45
SNX3-203ENST00000368979 FGF1P05230 155 aa24.12■■□□□ 1.45
SNX3-203ENST00000368979 AP1S1P61966 158 aa24.12■■□□□ 1.45
SNX3-203ENST00000368979 ECT2LQ008S8 904 aa24.12■■□□□ 1.45
SNX3-203ENST00000368979 FRG1Q14331 258 aaKnown RBP24.12■■□□□ 1.45
SNX3-203ENST00000368979 POU6F1Q14863 301 aa24.12■■□□□ 1.45
SNX3-203ENST00000368979 GEN1Q17RS7 908 aa24.12■■□□□ 1.45
SNX3-203ENST00000368979 ANKRD20A4Q4UJ75 823 aa24.12■■□□□ 1.45
SNX3-203ENST00000368979 ATXN7L2Q5T6C5 722 aaPredicted RBP24.12■■□□□ 1.45
SNX3-203ENST00000368979 PARM1Q6UWI2 310 aa24.12■■□□□ 1.45
SNX3-203ENST00000368979 SRLQ86TD4 932 aa24.12■■□□□ 1.45
SNX3-203ENST00000368979 WFIKKN2Q8TEU8 576 aa24.12■■□□□ 1.45
SNX3-203ENST00000368979 SUSD6Q92537 303 aa24.12■■□□□ 1.45
SNX3-203ENST00000368979 FGF14Q92915 247 aa24.12■■□□□ 1.45
SNX3-203ENST00000368979 ISG20Q96AZ6 181 aaKnown RBP24.12■■□□□ 1.45
SNX3-203ENST00000368979 ZNF669Q96BR6 464 aaPredicted RBP24.12■■□□□ 1.45
SNX3-203ENST00000368979 RPL10LQ96L21 214 aaKnown RBP24.12■■□□□ 1.45
SNX3-203ENST00000368979 RANBP9Q96S59 729 aa24.12■■□□□ 1.45
SNX3-203ENST00000368979 PAFAH2Q99487 392 aa24.12■■□□□ 1.45
SNX3-203ENST00000368979 TM6SF2Q9BZW4 377 aa24.12■■□□□ 1.45
SNX3-203ENST00000368979 CHRAC1Q9NRG0 131 aa24.12■■□□□ 1.45
SNX3-203ENST00000368979 SMYD2Q9NRG4 433 aa24.12■■□□□ 1.45
SNX3-203ENST00000368979 BCCIPQ9P287 314 aaKnown RBP eCLIP24.12■■□□□ 1.45
SNX3-203ENST00000368979 PRKAG3Q9UGI9 489 aa24.12■■□□□ 1.45
SNX3-203ENST00000368979 TCAF1Q9Y4C2 921 aa24.12■■□□□ 1.45
SNX3-203ENST00000368979 ARIH1Q9Y4X5 557 aaPredicted RBP24.12■■□□□ 1.45
SNX3-203ENST00000368979 KIAA1549LQ6ZVL6 1849 aa24.12■■□□□ 1.45
SNX3-203ENST00000368979 ZCWPW2A0A1B0GU75 182 aa24.11■■□□□ 1.45
SNX3-203ENST00000368979 TULP3O75386 442 aa24.11■■□□□ 1.45
SNX3-203ENST00000368979 PIAS1O75925 651 aa24.11■■□□□ 1.45
SNX3-203ENST00000368979 NDST3O95803 873 aa24.11■■□□□ 1.45
SNX3-203ENST00000368979 PSMC3P17980 439 aa24.11■■□□□ 1.45
SNX3-203ENST00000368979 DGKKQ5KSL6 1271 aa24.11■■□□□ 1.45
SNX3-203ENST00000368979 PKN3Q6P5Z2 889 aa24.11■■□□□ 1.45
SNX3-203ENST00000368979 CES3Q6UWW8 571 aa24.11■■□□□ 1.45
SNX3-203ENST00000368979 MICALL1Q8N3F8 863 aa24.11■■□□□ 1.45
SNX3-203ENST00000368979 PPHLN1Q8NEY8 458 aaKnown RBP24.11■■□□□ 1.45
SNX3-203ENST00000368979 KXD1Q9BQD3 176 aa24.11■■□□□ 1.45
SNX3-203ENST00000368979 CEP44Q9C0F1 390 aa24.11■■□□□ 1.45
SNX3-203ENST00000368979 NOVA2Q9UNW9 492 aaKnown RBP24.11■■□□□ 1.45
SNX3-203ENST00000368979 RAI2Q9Y5P3 530 aa24.11■■□□□ 1.45
SNX3-203ENST00000368979 FAM169AQ9Y6X4 670 aa24.11■■□□□ 1.45
SNX3-203ENST00000368979 REV3LO60673 3130 aa24.11■■□□□ 1.45
SNX3-203ENST00000368979 ECI2O75521 394 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 PRLP01236 227 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 POLR2EP19388 210 aaKnown RBP24.1■■□□□ 1.45
SNX3-203ENST00000368979 ADRA1DP25100 572 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 TRAF2Q12933 501 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 GRM2Q14416 872 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 GALNT3Q14435 633 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 C22orf39Q6P5X5 142 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 ZNF449Q6P9G9 518 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 YAF2Q8IY57 180 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.1■■□□□ 1.45
SNX3-203ENST00000368979 SLC44A1Q8WWI5 657 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 MFSD3Q96ES6 412 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 GAS2L1Q99501 681 aaPredicted RBP24.1■■□□□ 1.45
SNX3-203ENST00000368979 STMN4Q9H169 189 aaPredicted RBP24.1■■□□□ 1.45
SNX3-203ENST00000368979 PSMC3IPQ9P2W1 217 aaPredicted RBP24.1■■□□□ 1.45
SNX3-203ENST00000368979 CD207Q9UJ71 328 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 CHKBQ9Y259 395 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 USP15Q9Y4E8 981 aaPredicted RBP24.1■■□□□ 1.45
SNX3-203ENST00000368979 TRIOBPQ9H2D6 2365 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 CXorf49A8MYA2 514 aaPredicted RBP24.1■■□□□ 1.45
SNX3-203ENST00000368979 IGSF6O95976 241 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 NMBRP28336 390 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 MAPK8P45983 427 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 ADGRD1Q6QNK2 874 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 UNC5BQ8IZJ1 945 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 CYP4X1Q8N118 509 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 CPA6Q8N4T0 437 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 OR2AP1Q8NGE2 309 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 DCAKDQ8WVC6 231 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 CERS2Q96G23 380 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 EPS15L1Q9UBC2 864 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 ERVW-1Q9UQF0 538 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 PCDHGC4Q9Y5F7 938 aa24.1■■□□□ 1.45
SNX3-203ENST00000368979 HEATR9A2RTY3 570 aa24.09■■□□□ 1.45
SNX3-203ENST00000368979 GSRP00390 522 aa24.09■■□□□ 1.45
SNX3-203ENST00000368979 ALADP13716 330 aa24.09■■□□□ 1.45
SNX3-203ENST00000368979 MSH2P43246 934 aa24.09■■□□□ 1.45
SNX3-203ENST00000368979 VASPP50552 380 aaPredicted RBP24.09■■□□□ 1.45
SNX3-203ENST00000368979 RUNX3Q13761 415 aa24.09■■□□□ 1.45
SNX3-203ENST00000368979 PCDH20Q8N6Y1 951 aaKnown RBP24.09■■□□□ 1.45
SNX3-203ENST00000368979 MRGPRX3Q96LB0 322 aa24.09■■□□□ 1.45
SNX3-203ENST00000368979 ZNF778Q96MU6 729 aa24.09■■□□□ 1.45
SNX3-203ENST00000368979 FAM161BQ96MY7 647 aa24.09■■□□□ 1.45
SNX3-203ENST00000368979 TNKS2Q9H2K2 1166 aa24.09■■□□□ 1.45
SNX3-203ENST00000368979 FZD6O60353 706 aa24.08■■□□□ 1.45
SNX3-203ENST00000368979 CA4P22748 312 aa24.08■■□□□ 1.45
SNX3-203ENST00000368979 ATP5DP30049 168 aa24.08■■□□□ 1.45
SNX3-203ENST00000368979 SLC6A11P48066 632 aa24.08■■□□□ 1.45
SNX3-203ENST00000368979 SNRPD1P62314 119 aaKnown RBP24.08■■□□□ 1.45
SNX3-203ENST00000368979 NR1H3Q13133 447 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms