RNA–Protein interactions for RNA: ENST00000367379.5

PTPRC-204, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 5

Gene PTPRC, Length 517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-204ENST00000367379 TFAP4Q01664 338 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 ACVR2BQ13705 512 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 SHHQ15465 462 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 SMTNL2Q2TAL5 461 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 PIK3CD-AS1Q5SR53 167 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 C20orf194Q5TEA3 1177 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 RNF220Q5VTB9 566 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 NOL8Q76FK4 1167 aaKnown RBP5.25□□□□□ -1.57
PTPRC-204ENST00000367379 ANKRD33Q7Z3H0 272 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 FAM160B2Q86V87 743 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 TICAM2Q86XR7 235 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 ADGRF4Q8IZF3 695 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 FBXL14Q8N1E6 418 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 ZBTB8BQ8NAP8 495 aaPredicted RBP5.25□□□□□ -1.57
PTPRC-204ENST00000367379 GMCL1P1Q8NEA9 526 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 KLHDC9Q8NEP7 349 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 AKAP1Q92667 903 aaKnown RBP eCLIP5.25□□□□□ -1.57
PTPRC-204ENST00000367379 ZNF845Q96IR2 970 aaPredicted RBP5.25□□□□□ -1.57
PTPRC-204ENST00000367379 WDR24Q96S15 920 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 NTPCRQ9BSD7 190 aaKnown RBP5.25□□□□□ -1.57
PTPRC-204ENST00000367379 FSD1Q9BTV5 496 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 TTLL2Q9BWV7 592 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 SEZ6LQ9BYH1 1024 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 SLC25A32Q9H2D1 315 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 ACAD9Q9H845 621 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 RAVER2Q9HCJ3 691 aaKnown RBP5.25□□□□□ -1.57
PTPRC-204ENST00000367379 STARD7Q9NQZ5 370 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 RXFP3Q9NSD7 469 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 TXLNGQ9NUQ3 528 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 ZHX1Q9UKY1 873 aaPredicted RBP5.25□□□□□ -1.57
PTPRC-204ENST00000367379 A0A0G2JMZ2 1700 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 CDH23Q9H251 3354 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 FRMPD3Q5JV73 1810 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 CHD9Q3L8U1 2897 aa5.25□□□□□ -1.57
PTPRC-204ENST00000367379 IGKV6D-41A0A0C4DH26 115 aa5.24□□□□□ -1.57
PTPRC-204ENST00000367379 A0A0U1RQG5 324 aaPredicted RBP5.24□□□□□ -1.57
PTPRC-204ENST00000367379 TSPY2A6NKD2 308 aa5.24□□□□□ -1.57
PTPRC-204ENST00000367379 PLA2G6O60733 806 aa5.24□□□□□ -1.57
PTPRC-204ENST00000367379 CABYRO75952 493 aa5.24□□□□□ -1.57
PTPRC-204ENST00000367379 SNAI1O95863 264 aaPredicted RBP5.24□□□□□ -1.57
PTPRC-204ENST00000367379 TIMP1P01033 207 aa5.24□□□□□ -1.57
PTPRC-204ENST00000367379 MX1P20591 662 aa5.24□□□□□ -1.57
PTPRC-204ENST00000367379 CST5P28325 142 aaPredicted RBP5.24□□□□□ -1.57
PTPRC-204ENST00000367379 PPIGQ13427 754 aaKnown RBP eCLIP5.24□□□□□ -1.57
PTPRC-204ENST00000367379 C9orf50Q5SZB4 431 aa5.24□□□□□ -1.57
PTPRC-204ENST00000367379 ASPHD1Q5U4P2 390 aa5.24□□□□□ -1.57
PTPRC-204ENST00000367379 FAM90A2PQ658T7 463 aa5.24□□□□□ -1.57
PTPRC-204ENST00000367379 CAPRIN2Q6IMN6 1127 aaKnown RBP5.24□□□□□ -1.57
PTPRC-204ENST00000367379 CCDC129Q6ZRS4 1044 aa5.24□□□□□ -1.57
PTPRC-204ENST00000367379 SPATA2LQ8IUW3 424 aaPredicted RBP5.24□□□□□ -1.57
PTPRC-204ENST00000367379 SDR16C5Q8N3Y7 309 aa5.24□□□□□ -1.57
PTPRC-204ENST00000367379 ARL14EPQ8N8R7 260 aaPredicted RBP5.24□□□□□ -1.57
PTPRC-204ENST00000367379 GUCD1Q96NT3 240 aa5.24□□□□□ -1.57
PTPRC-204ENST00000367379 CDX2Q99626 313 aaPredicted RBP5.24□□□□□ -1.57
PTPRC-204ENST00000367379 WDR83Q9BRX9 315 aaKnown RBP5.24□□□□□ -1.57
PTPRC-204ENST00000367379 RBM38Q9H0Z9 239 aaKnown RBP5.24□□□□□ -1.57
PTPRC-204ENST00000367379 MTIF3Q9H2K0 278 aaKnown RBP5.24□□□□□ -1.57
PTPRC-204ENST00000367379 FAM204AQ9H8W3 233 aa5.24□□□□□ -1.57
PTPRC-204ENST00000367379 MDFICQ9P1T7 246 aa5.24□□□□□ -1.57
PTPRC-204ENST00000367379 ZNF212Q9UDV6 495 aa5.24□□□□□ -1.57
PTPRC-204ENST00000367379 ANAPC4Q9UJX5 808 aa5.24□□□□□ -1.57
PTPRC-204ENST00000367379 PNMA2Q9UL42 364 aa5.24□□□□□ -1.57
PTPRC-204ENST00000367379 VPS4AQ9UN37 437 aa5.24□□□□□ -1.57
PTPRC-204ENST00000367379 STX8Q9UNK0 236 aa5.24□□□□□ -1.57
PTPRC-204ENST00000367379 RIPK3Q9Y572 518 aa5.24□□□□□ -1.57
PTPRC-204ENST00000367379 PCDHB2Q9Y5E7 798 aa5.24□□□□□ -1.57
PTPRC-204ENST00000367379 COL11A1P12107 1806 aaPredicted RBP5.24□□□□□ -1.57
PTPRC-204ENST00000367379 SPTBN5Q9NRC6 3674 aaKnown RBP5.24□□□□□ -1.57
PTPRC-204ENST00000367379 PLXNA1Q9UIW2 1896 aa5.24□□□□□ -1.57
PTPRC-204ENST00000367379 TRANK1O15050 2925 aa5.24□□□□□ -1.57
PTPRC-204ENST00000367379 SYNRGQ9UMZ2 1314 aa5.23□□□□□ -1.57
PTPRC-204ENST00000367379 MYH4Q9Y623 1939 aa5.23□□□□□ -1.57
PTPRC-204ENST00000367379 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.23□□□□□ -1.57
PTPRC-204ENST00000367379 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.23□□□□□ -1.57
PTPRC-204ENST00000367379 TTC34A8MYJ7 566 aa5.23□□□□□ -1.57
PTPRC-204ENST00000367379 B4DLN1 442 aa5.23□□□□□ -1.57
PTPRC-204ENST00000367379 RANBP6O60518 1105 aaKnown RBP5.23□□□□□ -1.57
PTPRC-204ENST00000367379 ASGR1P07306 291 aa5.23□□□□□ -1.57
PTPRC-204ENST00000367379 MATN1P21941 496 aa5.23□□□□□ -1.57
PTPRC-204ENST00000367379 MCCP23508 829 aa5.23□□□□□ -1.57
PTPRC-204ENST00000367379 MRPL12P52815 198 aaKnown RBP5.23□□□□□ -1.57
PTPRC-204ENST00000367379 TNFAIP2Q03169 654 aa5.23□□□□□ -1.57
PTPRC-204ENST00000367379 KEAP1Q14145 624 aa5.23□□□□□ -1.57
PTPRC-204ENST00000367379 PGM5Q15124 567 aa5.23□□□□□ -1.57
PTPRC-204ENST00000367379 ALX1Q15699 326 aa5.23□□□□□ -1.57
PTPRC-204ENST00000367379 KRTAP27-1Q3LI81 207 aa5.23□□□□□ -1.57
PTPRC-204ENST00000367379 ANKRD45Q5TZF3 282 aa5.23□□□□□ -1.57
PTPRC-204ENST00000367379 PSRC1Q6PGN9 363 aaPredicted RBP5.23□□□□□ -1.57
PTPRC-204ENST00000367379 ARMCX2Q7L311 632 aa5.23□□□□□ -1.57
PTPRC-204ENST00000367379 FAM133AQ8N9E0 248 aa5.23□□□□□ -1.57
PTPRC-204ENST00000367379 ATP2A3Q93084 1043 aa5.23□□□□□ -1.57
PTPRC-204ENST00000367379 EVI5LQ96CN4 794 aa5.23□□□□□ -1.57
PTPRC-204ENST00000367379 SNX22Q96L94 193 aa5.23□□□□□ -1.57
PTPRC-204ENST00000367379 MPHOSPH6Q99547 160 aaKnown RBP5.23□□□□□ -1.57
PTPRC-204ENST00000367379 UPF3AQ9H1J1 476 aaKnown RBP5.23□□□□□ -1.57
PTPRC-204ENST00000367379 RNF146Q9NTX7 359 aa5.23□□□□□ -1.57
PTPRC-204ENST00000367379 ADD3Q9UEY8 706 aaKnown RBP5.23□□□□□ -1.57
PTPRC-204ENST00000367379 PLIN4Q96Q06 1357 aa5.23□□□□□ -1.57
PTPRC-204ENST00000367379 PARP14Q460N5 1801 aa5.23□□□□□ -1.57
PTPRC-204ENST00000367379 LOC102724159A0A0B4J2E5 919 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms