RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 SLC7A2P52569 658 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 OLR1P78380 273 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 NR1D2Q14995 579 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 ZNF618Q5T7W0 954 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 RETSATQ6NUM9 610 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 GPRIN3Q6ZVF9 776 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 NPHS1O60500 1241 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 NEK10Q6ZWH5 1172 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 GLT6D1Q7Z4J2 308 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 CYP4Z2PQ8N1L4 340 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 MAGEE2Q8TD90 523 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 ADARB2Q9NS39 739 aaKnown RBP11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 IPO13O94829 963 aaKnown RBP11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 PIGRP01833 764 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 C2P06681 752 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 FGFR1P11362 822 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 CYP2A7P20853 494 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 CDC16Q13042 620 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 TMEM63BQ5T3F8 832 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 DCLRE1AQ6PJP8 1040 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 SPATA19Q7Z5L4 167 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 PIGZQ86VD9 579 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 EDEM1Q92611 657 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 TAS2R1Q9NYW7 299 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 FAM20BO75063 409 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 TULP3O75386 442 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 RHOCP08134 193 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 PPIBP23284 216 aaKnown RBP11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 TEX44Q53QW1 395 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 MILR1Q7Z6M3 343 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 ZNF557Q8N988 423 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 MCOLN3Q8TDD5 553 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 C6orf62Q9GZU0 229 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 TBC1D30Q9Y2I9 924 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 C2CD4BA6NLJ0 364 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 KPNA5O15131 536 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 PEX11AO75192 247 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 DGKAP23743 735 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 ZCCHC2Q9C0B9 1178 aaKnown RBP11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 OTCP00480 354 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 CHI3L1P36222 383 aaPredicted RBP11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 SCNN1BP51168 640 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 PLK1P53350 603 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 CENPNQ96H22 339 aaPredicted RBP11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 Q96MT0 163 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 FAM126AQ9BYI3 521 aaPredicted RBP11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 NMRK2Q9NPI5 230 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 SLC22A3O75751 556 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 TRIP4Q15650 581 aaPredicted RBP11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 C19orf18Q8NEA5 215 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 UROC1Q96N76 676 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 CRNNQ9UBG3 495 aaPredicted RBP11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 VPS28Q9UK41 221 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 INVSQ9Y283 1065 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 PCDHB5Q9Y5E4 795 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 USP12O75317 370 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 FARP2O94887 1054 aaPredicted RBP11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 HMBSP08397 361 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 TM4SF1P30408 202 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 IL27RAQ6UWB1 636 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 HM13Q8TCT9 377 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 ZNF384Q8TF68 577 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 SENP8Q96LD8 212 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 SF3B1O75533 1304 aaKnown RBP eCLIP11.88□□□□□ -0.513e-6■■■■■ 75.9
CDC42BPA-202ENST00000366764 ERCC2P18074 760 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 ACSBG2Q5FVE4 666 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 ATL1Q8WXF7 558 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 SMPD3Q9NY59 655 aaPredicted RBP11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 PRR23AA6NEV1 266 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 CAPN8A6NHC0 703 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 OR1G1P47890 313 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 CRADDP78560 199 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 SLC18A2Q05940 514 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 CUZD1Q86UP6 607 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 OLFM1Q99784 485 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 TAF1P21675 1872 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 DPYSL4O14531 572 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 ADGRE1Q14246 886 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 CCDC142Q17RM4 750 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 RNF220Q5VTB9 566 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 PCDH20Q8N6Y1 951 aaKnown RBP11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 USP4Q13107 963 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 RINLQ6ZS11 566 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 ZNF554Q86TJ5 538 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 MTMR14Q8NCE2 650 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 PWWP2AQ96N64 755 aa11.88□□□□□ -0.51
CDC42BPA-202ENST00000366764 IL12AP29459 219 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 HS6ST3Q8IZP7 471 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 CMASQ8NFW8 434 aaPredicted RBP11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 PPTC7Q8NI37 304 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 ACOX2Q99424 681 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.87□□□□□ -0.516e-9■■■□□ 16.6
CDC42BPA-202ENST00000366764 GNPTGQ9UJJ9 305 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 BTBD3Q9Y2F9 522 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 MAFBQ9Y5Q3 323 aaPredicted RBP11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 SOX11P35716 441 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 THPOP40225 353 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 RHOAP61586 193 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 CTXN3Q4LDR2 81 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 TRIQKQ629K1 86 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms