RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 WFIKKN2Q8TEU8 576 aa8.34□□□□□ -1.07
MRPL55-211ENST00000366738 COG1Q8WTW3 980 aa8.34□□□□□ -1.07
MRPL55-211ENST00000366738 AZIN2Q96A70 460 aa8.34□□□□□ -1.07
MRPL55-211ENST00000366738 FAF2Q96CS3 445 aa8.34□□□□□ -1.07
MRPL55-211ENST00000366738 TBC1D31Q96DN5 1066 aa8.34□□□□□ -1.07
MRPL55-211ENST00000366738 C1orf74Q96LT6 269 aa8.34□□□□□ -1.07
MRPL55-211ENST00000366738 RPRD1AQ96P16 312 aaPredicted RBP8.34□□□□□ -1.07
MRPL55-211ENST00000366738 OSBPL9Q96SU4 736 aa8.34□□□□□ -1.07
MRPL55-211ENST00000366738 EPAS1Q99814 870 aa8.34□□□□□ -1.07
MRPL55-211ENST00000366738 ZNF670Q9BS34 389 aa8.34□□□□□ -1.07
MRPL55-211ENST00000366738 NRSN2Q9GZP1 204 aa8.34□□□□□ -1.07
MRPL55-211ENST00000366738 CPNE5Q9HCH3 593 aa8.34□□□□□ -1.07
MRPL55-211ENST00000366738 DDX56Q9NY93 547 aaKnown RBP8.34□□□□□ -1.07
MRPL55-211ENST00000366738 STIM2Q9P246 746 aa8.34□□□□□ -1.07
MRPL55-211ENST00000366738 ZNF212Q9UDV6 495 aa8.34□□□□□ -1.07
MRPL55-211ENST00000366738 SLC12A6Q9UHW9 1150 aa8.34□□□□□ -1.07
MRPL55-211ENST00000366738 SNX12Q9UMY4 172 aa8.34□□□□□ -1.07
MRPL55-211ENST00000366738 PCDHGA1Q9Y5H4 931 aa8.34□□□□□ -1.07
MRPL55-211ENST00000366738 TEP1Q99973 2627 aaKnown RBP8.34□□□□□ -1.07
MRPL55-211ENST00000366738 A0A1B0GTQ1 180 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 TCRBV7S2A1N4TA0A589 114 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 CTAGE9A4FU28 777 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 TTC34A8MYJ7 566 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 B8ZZF3 427 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 H3BRJ5 948 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 WNT9AO14904 365 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 SLC28A2O43868 658 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 MFSD11O43934 449 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 ZNF500O60304 480 aaPredicted RBP8.33□□□□□ -1.08
MRPL55-211ENST00000366738 SIN3BO75182 1162 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 UTP20O75691 2785 aaKnown RBP8.33□□□□□ -1.08
MRPL55-211ENST00000366738 MAP3K6O95382 1288 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 SEMA4FO95754 770 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 ERCC2P18074 760 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 AMPD1P23109 780 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 EPHB2P29323 1055 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 CASQ1P31415 396 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 ACTN2P35609 894 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 CSKP41240 450 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 METAP1P53582 386 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 DYNLT1P63172 113 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 SRSF1Q07955 248 aaKnown RBP eCLIP8.33□□□□□ -1.08
MRPL55-211ENST00000366738 PDK2Q15119 407 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 SHBQ15464 509 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 TAZQ16635 292 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 TBC1D25Q3MII6 688 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 C5orf22Q49AR2 442 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 ANKRD20A8PQ5CZ79 823 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 MPP7Q5T2T1 576 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 PAPD7Q5XG87 772 aaKnown RBP8.33□□□□□ -1.08
MRPL55-211ENST00000366738 RFX6Q8HWS3 928 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 EID2Q8N6I1 236 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 PLD5Q8N7P1 536 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 EXD1Q8NHP7 514 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 PCDH19Q8TAB3 1148 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 FIBINQ8TAL6 211 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 ZNF592Q92610 1267 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 TTC17Q96AE7 1141 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 RBM41Q96IZ5 413 aaKnown RBP8.33□□□□□ -1.08
MRPL55-211ENST00000366738 MS4A14Q96JA4 679 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 SLC6A18Q96N87 628 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 LGMNQ99538 433 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 HEMGNQ9BXL5 484 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 TRIM4Q9C037 500 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 PCED1AQ9H1Q7 454 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 RSPH9Q9H1X1 276 aaPredicted RBP8.33□□□□□ -1.08
MRPL55-211ENST00000366738 CARD9Q9H257 536 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 PPARGC1AQ9UBK2 798 aaKnown RBP8.33□□□□□ -1.08
MRPL55-211ENST00000366738 SLCO3A1Q9UIG8 710 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 PLA2G4CQ9UP65 541 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.33□□□□□ -1.08
MRPL55-211ENST00000366738 AHCTF1Q8WYP5 2266 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 DOCK4Q8N1I0 1966 aa8.33□□□□□ -1.08
MRPL55-211ENST00000366738 USP9YO00507 2555 aaPredicted RBP8.32□□□□□ -1.08
MRPL55-211ENST00000366738 NYNRINQ9P2P1 1898 aaKnown RBP8.32□□□□□ -1.08
MRPL55-211ENST00000366738 DRGXA6NNA5 263 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 ZRANB2O95218 330 aaKnown RBP eCLIP8.32□□□□□ -1.08
MRPL55-211ENST00000366738 LUC7L3O95232 432 aaKnown RBP8.32□□□□□ -1.08
MRPL55-211ENST00000366738 WNT1P04628 370 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 ITGAVP06756 1048 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 C6P13671 934 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 VAV1P15498 845 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 PECAM1P16284 738 aaPredicted RBP8.32□□□□□ -1.08
MRPL55-211ENST00000366738 POLR2EP19388 210 aaKnown RBP8.32□□□□□ -1.08
MRPL55-211ENST00000366738 CD27P26842 260 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 PTPN7P35236 360 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 ARL4AP40617 200 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 C21orf59P57076 290 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 TMPRSS3P57727 454 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 RHDQ02161 417 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 GBE1Q04446 702 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 KLF1Q13351 362 aaPredicted RBP8.32□□□□□ -1.08
MRPL55-211ENST00000366738 SIX1Q15475 284 aaPredicted RBP8.32□□□□□ -1.08
MRPL55-211ENST00000366738 PPP2R5EQ16537 467 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 HNRNPA1L2Q32P51 320 aaKnown RBP8.32□□□□□ -1.08
MRPL55-211ENST00000366738 ODF2Q5BJF6 829 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 TFDP3Q5H9I0 405 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 PITRM1Q5JRX3 1037 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 RABGAP1LQ5R372 815 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 C9orf64Q5T6V5 341 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms