RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 ZSCAN31Q96LW9 406 aaPredicted RBP4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 REEP2Q9BRK0 252 aa4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 HERPUD2Q9BSE4 406 aa4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 C1QTNF4Q9BXJ3 329 aa4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 IL25Q9H293 177 aa4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 TAOK3Q9H2K8 898 aa4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 PPCSQ9HAB8 311 aa4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 OR6C3Q9NZP0 311 aa4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 PCDHGB5Q9Y5G0 923 aa4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 ADGRF5Q8IZF2 1346 aa4.22□□□□□ -1.73
RNU6-553P-201ENST00000364047 A0A1B0GUV1 79 aa4.22□□□□□ -1.73
RNU6-553P-201ENST00000364047 VNN2O95498 520 aa4.22□□□□□ -1.73
RNU6-553P-201ENST00000364047 BLKP51451 505 aa4.22□□□□□ -1.73
RNU6-553P-201ENST00000364047 HDAC4P56524 1084 aa4.22□□□□□ -1.73
RNU6-553P-201ENST00000364047 EEF1A2Q05639 463 aaKnown RBP4.22□□□□□ -1.73
RNU6-553P-201ENST00000364047 RUNX2Q13950 521 aa4.22□□□□□ -1.73
RNU6-553P-201ENST00000364047 KIF19Q2TAC6 998 aa4.22□□□□□ -1.73
RNU6-553P-201ENST00000364047 MAP3K21Q5TCX8 1036 aa4.22□□□□□ -1.73
RNU6-553P-201ENST00000364047 RETSATQ6NUM9 610 aa4.22□□□□□ -1.73
RNU6-553P-201ENST00000364047 KLHL24Q6TFL4 600 aa4.22□□□□□ -1.73
RNU6-553P-201ENST00000364047 C17orf99Q6UX52 265 aa4.22□□□□□ -1.73
RNU6-553P-201ENST00000364047 MOB3CQ70IA8 216 aa4.22□□□□□ -1.73
RNU6-553P-201ENST00000364047 AADATQ8N5Z0 425 aa4.22□□□□□ -1.73
RNU6-553P-201ENST00000364047 LILRB1Q8NHL6 650 aaPredicted RBP4.22□□□□□ -1.73
RNU6-553P-201ENST00000364047 RFWD2Q8NHY2 731 aa4.22□□□□□ -1.73
RNU6-553P-201ENST00000364047 OTULINQ96BN8 352 aa4.22□□□□□ -1.73
RNU6-553P-201ENST00000364047 NDRG3Q9UGV2 375 aa4.22□□□□□ -1.73
RNU6-553P-201ENST00000364047 EVPLQ92817 2033 aa4.22□□□□□ -1.73
RNU6-553P-201ENST00000364047 IGLV5-37A0A075B6J1 123 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 LOC102724159A0A0B4J2E5 919 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 A0A0U1RQJ8 604 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 PABPN1LA6NDY0 278 aaKnown RBP4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 CBY3A6NI87 242 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 SRRM3A6NNA2 597 aaPredicted RBP4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 J3KR12 359 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 SLC16A5O15375 505 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 DAOP14920 347 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 ZNF8P17098 575 aaPredicted RBP4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 FMO4P31512 558 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 CXCR3P49682 368 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 ERVFC1-1P60608 527 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 YWHAZP63104 245 aaKnown RBP4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 DDR1Q08345 913 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 PPFIA1Q13136 1202 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 MYBPHQ13203 477 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 PWP2Q15269 919 aaKnown RBP4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 XKR9Q5GH70 373 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 NEK10Q6ZWH5 1172 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 ADGRG6Q86SQ4 1221 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 ANKRD42Q8N9B4 389 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 LSM14AQ8ND56 463 aaKnown RBP4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 ARRDC2Q8TBH0 407 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 IGSF21Q96ID5 467 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 ADGRG7Q96K78 797 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 DUX5Q96PT3 197 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 EYA3Q99504 573 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 VPS33BQ9H267 617 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 RETREG1Q9H6L5 497 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 ZNF556Q9HAH1 456 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 CYSLTR2Q9NS75 346 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 ICAM5Q9UMF0 924 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 GPR52Q9Y2T5 361 aa4.21□□□□□ -1.74
RNU6-553P-201ENST00000364047 IFRD1O00458 451 aaPredicted RBP4.2□□□□□ -1.74
RNU6-553P-201ENST00000364047 RGS11O94810 467 aa4.2□□□□□ -1.74
RNU6-553P-201ENST00000364047 SLC2A4P14672 509 aa4.2□□□□□ -1.74
RNU6-553P-201ENST00000364047 SRD5A1P18405 259 aa4.2□□□□□ -1.74
RNU6-553P-201ENST00000364047 RYKP34925 604 aa4.2□□□□□ -1.74
RNU6-553P-201ENST00000364047 PEX5P50542 639 aa4.2□□□□□ -1.74
RNU6-553P-201ENST00000364047 DHX34Q14147 1143 aaKnown RBP4.2□□□□□ -1.74
RNU6-553P-201ENST00000364047 ARHGEF6Q15052 776 aa4.2□□□□□ -1.74
RNU6-553P-201ENST00000364047 SF3B4Q15427 424 aaKnown RBP eCLIP4.2□□□□□ -1.74
RNU6-553P-201ENST00000364047 WDR45BQ5MNZ6 344 aa4.2□□□□□ -1.74
RNU6-553P-201ENST00000364047 ATG16L1Q676U5 607 aa4.2□□□□□ -1.74
RNU6-553P-201ENST00000364047 CCDC129Q6ZRS4 1044 aa4.2□□□□□ -1.74
RNU6-553P-201ENST00000364047 Q6ZTC4 211 aa4.2□□□□□ -1.74
RNU6-553P-201ENST00000364047 TBC1D26Q86UD7 250 aa4.2□□□□□ -1.74
RNU6-553P-201ENST00000364047 FAM160B2Q86V87 743 aa4.2□□□□□ -1.74
RNU6-553P-201ENST00000364047 PGBD5Q8N414 524 aa4.2□□□□□ -1.74
RNU6-553P-201ENST00000364047 GJC3Q8NFK1 279 aa4.2□□□□□ -1.74
RNU6-553P-201ENST00000364047 SPATA3Q8NHX4 192 aa4.2□□□□□ -1.74
RNU6-553P-201ENST00000364047 ZC3HAV1LQ96H79 300 aaKnown RBP4.2□□□□□ -1.74
RNU6-553P-201ENST00000364047 LRFN5Q96NI6 719 aa4.2□□□□□ -1.74
RNU6-553P-201ENST00000364047 DDX31Q9H8H2 851 aaKnown RBP4.2□□□□□ -1.74
RNU6-553P-201ENST00000364047 RIC8AQ9NPQ8 531 aa4.2□□□□□ -1.74
RNU6-553P-201ENST00000364047 NFS1Q9Y697 457 aa4.2□□□□□ -1.74
RNU6-553P-201ENST00000364047 HSPB2A8KAH6 182 aa4.19□□□□□ -1.74
RNU6-553P-201ENST00000364047 KLRF2D3W0D1 207 aa4.19□□□□□ -1.74
RNU6-553P-201ENST00000364047 LDB3O75112 727 aa4.19□□□□□ -1.74
RNU6-553P-201ENST00000364047 ZNF432O94892 652 aa4.19□□□□□ -1.74
RNU6-553P-201ENST00000364047 SNRNP70P08621 437 aaKnown RBP4.19□□□□□ -1.74
RNU6-553P-201ENST00000364047 PCNAP12004 261 aa4.19□□□□□ -1.74
RNU6-553P-201ENST00000364047 PTPN2P17706 415 aa4.19□□□□□ -1.74
RNU6-553P-201ENST00000364047 UBE3AQ05086 875 aa4.19□□□□□ -1.74
RNU6-553P-201ENST00000364047 SNTA1Q13424 505 aa4.19□□□□□ -1.74
RNU6-553P-201ENST00000364047 HSPB2Q16082 182 aa4.19□□□□□ -1.74
RNU6-553P-201ENST00000364047 ESCO2Q56NI9 601 aa4.19□□□□□ -1.74
RNU6-553P-201ENST00000364047 RHBDF2Q6PJF5 856 aa4.19□□□□□ -1.74
RNU6-553P-201ENST00000364047 BBS12Q6ZW61 710 aa4.19□□□□□ -1.74
RNU6-553P-201ENST00000364047 SHFQ7M4L6 423 aa4.19□□□□□ -1.74
RNU6-553P-201ENST00000364047 CUZD1Q86UP6 607 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms