RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 OR7A2PQ8NGA2 310 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 MYDGFQ969H8 173 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 TLR10Q9BXR5 811 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 MAP1SQ66K74 1059 aaPredicted RBP18.51■□□□□ 0.55
SHANK1-202ENST00000359082 FNIP1Q8TF40 1166 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 SLC47A1Q96FL8 570 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 BTBD3Q9Y2F9 522 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 TCRBV5S4A2TA0A5A2 114 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 GSAPA4D1B5 854 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 GTPBP1O00178 669 aaKnown RBP18.51■□□□□ 0.55
SHANK1-202ENST00000359082 NTRK3Q16288 839 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 TIMM50Q3ZCQ8 353 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 ARHGAP36Q6ZRI8 547 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 UBE2E3Q969T4 207 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 SLC35C1Q96A29 364 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 FAM25EA8MYX2 175 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 CST1P01037 141 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 CXCR2P25025 360 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 FNBP1LQ5T0N5 605 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 APTXQ7Z2E3 356 aaKnown RBP18.51■□□□□ 0.55
SHANK1-202ENST00000359082 CAMK1DQ8IU85 385 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 SOCS4Q8WXH5 440 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 ABCB10Q9NRK6 738 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 CPS1P31327 1500 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 GMFGO60234 142 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 UGT2B15P54855 530 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 BROXQ5VW32 411 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 ULK2Q8IYT8 1036 aa18.51■□□□□ 0.55
SHANK1-202ENST00000359082 NCOA3Q9Y6Q9 1424 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 NR1D2Q14995 579 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 RIMS1Q86UR5 1692 aaKnown RBP18.5■□□□□ 0.55
SHANK1-202ENST00000359082 LIASO43766 372 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 MLYCDO95822 493 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 ITGA3P26006 1051 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 OMPP47874 163 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 IKBKEQ14164 716 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 IRGCQ6NXR0 463 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 SPESP1Q6UW49 350 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 OR10G6Q8NH81 332 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 MYLPFQ96A32 169 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 CERS2Q96G23 380 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 Q96MT0 163 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 PHF11Q9UIL8 331 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 PSME2Q9UL46 239 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 CORO2BQ9UQ03 480 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 MAPKAPK3Q16644 382 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 PLA2G4EQ3MJ16 856 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 NIPA1Q7RTP0 329 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 RAD51AP1Q96B01 352 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 ZNF354BQ96LW1 612 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 FNDC11Q9BVV2 318 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 BRD9Q9H8M2 597 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 SPAG4Q9NPE6 437 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 MORF4L1Q9UBU8 362 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 LEF1Q9UJU2 399 aaPredicted RBP18.5■□□□□ 0.55
SHANK1-202ENST00000359082 SIGLEC16A6NMB1 481 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 H0Y858 1186 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 PACS2Q86VP3 889 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 ALLCQ8N6M5 410 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 CDCA5Q96FF9 252 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 MANSC4A6NHS7 340 aaPredicted RBP18.5■□□□□ 0.55
SHANK1-202ENST00000359082 CYP4B1P13584 511 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 NPR3P17342 541 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 ABHD16BQ9H3Z7 469 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 SLC27A5Q9Y2P5 690 aa18.5■□□□□ 0.55
SHANK1-202ENST00000359082 UBE2QL1A1L167 161 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 MAGEC1O60732 1142 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 HGFP14210 728 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 TFEBP19484 476 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 RGS1Q08116 209 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 PERM1Q5SV97 790 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 HECTD3Q5T447 861 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 PHF10Q8WUB8 498 aaKnown RBP18.49■□□□□ 0.55
SHANK1-202ENST00000359082 QKIQ96PU8 341 aaKnown RBP eCLIP18.49■□□□□ 0.55
SHANK1-202ENST00000359082 SPATA5L1Q9BVQ7 753 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 GLIS2Q9BZE0 524 aaPredicted RBP18.49■□□□□ 0.55
SHANK1-202ENST00000359082 ATP13A3Q9H7F0 1226 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 RIMBP3CA6NJZ7 1639 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 RIMBP3BA6NNM3 1639 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 RIMBP3Q9UFD9 1639 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 CEP170BQ9Y4F5 1589 aaPredicted RBP18.49■□□□□ 0.55
SHANK1-202ENST00000359082 OR10H3O60404 316 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 BUD31P41223 144 aaPredicted RBP18.49■□□□□ 0.55
SHANK1-202ENST00000359082 CDYL2Q8N8U2 506 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 FAM98AQ8NCA5 519 aaKnown RBP18.49■□□□□ 0.55
SHANK1-202ENST00000359082 PSMA8Q8TAA3 256 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 LPPQ93052 612 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 ZYG11BQ9C0D3 744 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 ACP6Q9NPH0 428 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 TCEA3O75764 348 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 MYL9P24844 172 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 PSME3P61289 254 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 PARGQ86W56 976 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 C2orf49Q9BVC5 232 aaPredicted RBP18.49■□□□□ 0.55
SHANK1-202ENST00000359082 PRAMEF19Q5SWL8 479 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 SDHAF4Q5VUM1 108 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 ADGRG2Q8IZP9 1017 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 FBXW8Q8N3Y1 598 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 UROC1Q96N76 676 aa18.49■□□□□ 0.55
SHANK1-202ENST00000359082 EFR3BQ9Y2G0 817 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms