RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 TSHRP16473 764 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 SAT1P21673 171 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 RGRP47804 291 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 CDH17Q12864 832 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 NR1H3Q13133 447 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 SERINC3Q13530 473 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 PRPSAP1Q14558 356 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 ESRP1Q6NXG1 681 aaKnown RBP12.79□□□□□ -0.36
GGPS1-202ENST00000358966 C16orf46Q6P387 395 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 ST13P5Q8NFI4 369 aaPredicted RBP12.79□□□□□ -0.36
GGPS1-202ENST00000358966 ADAMTS19Q8TE59 1207 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 MYRFLQ96LU7 910 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 FCRL5Q96RD9 977 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 SRPK1Q96SB4 655 aaKnown RBP12.79□□□□□ -0.36
GGPS1-202ENST00000358966 C17orf80Q9BSJ5 609 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 C20orf96Q9NUD7 363 aaPredicted RBP12.79□□□□□ -0.36
GGPS1-202ENST00000358966 ZNF358Q9NW07 568 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 OBSL1O75147 1896 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 H3BNC9 293 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 TPP1O14773 563 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 KRT37O76014 449 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 KRT38O76015 456 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 ALDH1A2O94788 518 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 HNRNPCP07910 306 aaKnown RBP eCLIP12.78□□□□□ -0.36
GGPS1-202ENST00000358966 CCDC166P0CW27 439 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 HOXD9P28356 352 aaPredicted RBP12.78□□□□□ -0.36
GGPS1-202ENST00000358966 NDST2P52849 883 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 OXCT1P55809 520 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 PTPRCAPQ14761 206 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 PTPRRQ15256 657 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 RASA2Q15283 850 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 TMEM240Q5SV17 173 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 NAPEPLDQ6IQ20 393 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 NANOGNBQ7Z5D8 188 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 DENND6AQ8IWF6 608 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.78□□□□□ -0.36
GGPS1-202ENST00000358966 VCX3BQ9H321 246 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 VCX3AQ9NNX9 186 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 IARS2Q9NSE4 1012 aaKnown RBP12.78□□□□□ -0.36
GGPS1-202ENST00000358966 HBS1LQ9Y450 684 aaKnown RBP12.78□□□□□ -0.36
GGPS1-202ENST00000358966 CPQQ9Y646 472 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 CBX4O00257 560 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 LSM1O15116 133 aaKnown RBP12.78□□□□□ -0.36
GGPS1-202ENST00000358966 CACNG3O60359 315 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 SNAP91O60641 907 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 C8AP07357 584 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 KRT16P08779 473 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 IRS1P35568 1242 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 SLC11A2P49281 568 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 EPHB3P54753 998 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 OVGP1Q12889 678 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 ZNF697Q5TEC3 545 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 TIGD7Q6NT04 549 aaPredicted RBP12.78□□□□□ -0.36
GGPS1-202ENST00000358966 TMEM135Q86UB9 458 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 NDUFAF2Q8N183 169 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 KIF2BQ8N4N8 673 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 SEMA3CQ99985 751 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 UNKQ9C0B0 810 aaKnown RBP12.78□□□□□ -0.36
GGPS1-202ENST00000358966 CCDC134Q9H6E4 229 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 ZNF395Q9H8N7 513 aaPredicted RBP12.78□□□□□ -0.36
GGPS1-202ENST00000358966 ENTPD7Q9NQZ7 604 aa12.78□□□□□ -0.36
GGPS1-202ENST00000358966 UXTQ9UBK9 157 aaPredicted RBP12.78□□□□□ -0.36
GGPS1-202ENST00000358966 TLL1O43897 1013 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 VAPBO95292 243 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 F11P03951 625 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 CKMP06732 381 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 CTSAP10619 480 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 HDCP19113 662 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 HTR7P34969 479 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 CTNNB1P35222 781 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 ADRA1AP35348 466 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 CCR2P41597 374 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 PHEXP78562 749 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 IL9RQ01113 521 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 FPGSQ05932 587 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 CTBP1Q13363 440 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 GALNT3Q14435 633 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 SEPT7Q16181 437 aaKnown RBP12.77□□□□□ -0.36
GGPS1-202ENST00000358966 CNGA3Q16281 694 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 STRA8Q7Z7C7 330 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 KCNMB4Q86W47 210 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 TCEAL8Q8IYN2 117 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 PDZD8Q8NEN9 1154 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 UCMAQ8WVF2 138 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 APOPT1Q96IL0 206 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 KLF16Q9BXK1 252 aaPredicted RBP12.77□□□□□ -0.36
GGPS1-202ENST00000358966 UBAP1Q9NZ09 502 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 SENP1Q9P0U3 644 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 PRKAG2Q9UGJ0 569 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 SMG5Q9UPR3 1016 aaKnown RBP12.77□□□□□ -0.36
GGPS1-202ENST00000358966 KCTD3Q9Y597 815 aa12.77□□□□□ -0.36
GGPS1-202ENST00000358966 CHD5Q8TDI0 1954 aa12.77□□□□□ -0.37
GGPS1-202ENST00000358966 COPEO14579 308 aa12.77□□□□□ -0.37
GGPS1-202ENST00000358966 AURKAO14965 403 aa12.77□□□□□ -0.37
GGPS1-202ENST00000358966 SLC4A1P02730 911 aa12.77□□□□□ -0.37
GGPS1-202ENST00000358966 ITGA2BP08514 1039 aa12.77□□□□□ -0.37
GGPS1-202ENST00000358966 ARNTP27540 789 aa12.77□□□□□ -0.37
GGPS1-202ENST00000358966 HOXD12P35452 270 aa12.77□□□□□ -0.37
GGPS1-202ENST00000358966 GNA12Q03113 381 aa12.77□□□□□ -0.37
GGPS1-202ENST00000358966 HNRNPDQ14103 355 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms