RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 GOLGA6DP0CG33 693 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 ACADMP11310 421 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 GABRG2P18507 467 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 RPS14P62263 151 aaKnown RBP15.4■□□□□ 0.06
TPM1-206ENST00000358278 DHX34Q14147 1143 aaKnown RBP15.4■□□□□ 0.06
TPM1-206ENST00000358278 KCTD19Q17RG1 926 aaPredicted RBP15.4■□□□□ 0.06
TPM1-206ENST00000358278 TTC31Q49AM3 519 aaPredicted RBP15.4■□□□□ 0.06
TPM1-206ENST00000358278 C4orf22Q6V702 233 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 GDPD4Q6W3E5 623 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 MAMSTRQ6ZN01 415 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 CAMK1DQ8IU85 385 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 SLCO2A1Q92959 643 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 GOLGA6AQ9NYA3 693 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 PCDHGC4Q9Y5F7 938 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 MYLKQ15746 1914 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 SOCS5O75159 536 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 PMPCBO75439 489 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 MMP2P08253 660 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 SLC8A1P32418 973 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 RPL22P35268 128 aaKnown RBP15.4■□□□□ 0.06
TPM1-206ENST00000358278 TNNT3P45378 269 aaPredicted RBP15.4■□□□□ 0.06
TPM1-206ENST00000358278 SKOR1P84550 965 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 PCSK7Q16549 785 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 PARP6Q2NL67 630 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 FAXCQ5TGI0 409 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 CAMKK1Q8N5S9 505 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 DTWD2Q8NBA8 298 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 MDGA1Q8NFP4 955 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 ZNF641Q96N77 438 aaPredicted RBP15.4■□□□□ 0.06
TPM1-206ENST00000358278 KLHL32Q96NJ5 620 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 CARD6Q9BX69 1037 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 SUV39H2Q9H5I1 410 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 C11orf16Q9NQ32 467 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 RAB6BQ9NRW1 208 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 FAM153AQ9UHL3 310 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 AAR2Q9Y312 384 aaKnown RBP15.4■□□□□ 0.06
TPM1-206ENST00000358278 RAI2Q9Y5P3 530 aa15.4■□□□□ 0.06
TPM1-206ENST00000358278 TRPM6Q9BX84 2022 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 DOCK9Q9BZ29 2069 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 PRR33A8MZF0 331 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 E7EVH7 732 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 MID1O15344 667 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 TTI1O43156 1089 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 PAPSS2O95340 614 aaPredicted RBP15.39■□□□□ 0.05
TPM1-206ENST00000358278 METTL18O95568 372 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 C5AR1P21730 350 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 AVPR2P30518 371 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 FDFT1P37268 417 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 GEMP55040 296 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 BASP1P80723 227 aaKnown RBP15.39■□□□□ 0.05
TPM1-206ENST00000358278 ZBTB16Q05516 673 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 TRAF2Q12933 501 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 GPS1Q13098 491 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 MPP3Q13368 585 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 SLC14A2Q15849 920 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 ZNF805Q5CZA5 627 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 SYDE1Q6ZW31 735 aaPredicted RBP15.39■□□□□ 0.05
TPM1-206ENST00000358278 MAATS1Q7Z4T9 603 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 PRPF39Q86UA1 669 aaKnown RBP15.39■□□□□ 0.05
TPM1-206ENST00000358278 JAMLQ86YT9 394 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 C1orf210Q8IVY1 113 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 CCHCR1Q8TD31 782 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 GANCQ8TET4 914 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 LRRC45Q96CN5 670 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 IFT43Q96FT9 208 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 OXNAD1Q96HP4 312 aaPredicted RBP15.39■□□□□ 0.05
TPM1-206ENST00000358278 NSMCE3Q96MG7 304 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 FSD1LQ9BXM9 530 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 TDRD1Q9BXT4 1180 aaKnown RBP15.39■□□□□ 0.05
TPM1-206ENST00000358278 L2HGDHQ9H9P8 463 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 VPS45Q9NRW7 570 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 ASIC3Q9UHC3 531 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 SCML1Q9UN30 329 aa15.39■□□□□ 0.05
TPM1-206ENST00000358278 GPR37L1O60883 481 aa15.38■□□□□ 0.05
TPM1-206ENST00000358278 ITGB7P26010 798 aa15.38■□□□□ 0.05
TPM1-206ENST00000358278 PTGIRP43119 386 aa15.38■□□□□ 0.05
TPM1-206ENST00000358278 PXNP49023 591 aaPredicted RBP15.38■□□□□ 0.05
TPM1-206ENST00000358278 LMAN1P49257 510 aa15.38■□□□□ 0.05
TPM1-206ENST00000358278 METAP1P53582 386 aa15.38■□□□□ 0.05
TPM1-206ENST00000358278 TMEM31Q5JXX7 168 aa15.38■□□□□ 0.05
TPM1-206ENST00000358278 ARMC12Q5T9G4 340 aa15.38■□□□□ 0.05
TPM1-206ENST00000358278 C8orf74Q6P047 294 aa15.38■□□□□ 0.05
TPM1-206ENST00000358278 IPMKQ8NFU5 416 aa15.38■□□□□ 0.05
TPM1-206ENST00000358278 OMDQ99983 421 aa15.38■□□□□ 0.05
TPM1-206ENST00000358278 C1QTNF1Q9BXJ1 281 aa15.38■□□□□ 0.05
TPM1-206ENST00000358278 PABPC3Q9H361 631 aaKnown RBP15.38■□□□□ 0.05
TPM1-206ENST00000358278 PRMT8Q9NR22 394 aaPredicted RBP15.38■□□□□ 0.05
TPM1-206ENST00000358278 PCDHB9Q9Y5E1 797 aa15.38■□□□□ 0.05
TPM1-206ENST00000358278 VPS13AQ96RL7 3174 aa15.38■□□□□ 0.05
TPM1-206ENST00000358278 A0A1W2PP55 124 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 K7ESF4 209 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 HTRA2O43464 458 aaPredicted RBP15.37■□□□□ 0.05
TPM1-206ENST00000358278 XPAP23025 273 aaPredicted RBP15.37■□□□□ 0.05
TPM1-206ENST00000358278 TERF1P54274 439 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 EPHB1P54762 984 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 WNT3AP56704 352 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 SFSWAPQ12872 951 aaKnown RBP15.37■□□□□ 0.05
TPM1-206ENST00000358278 PTK6Q13882 451 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 IHHQ14623 411 aa15.37■□□□□ 0.05
TPM1-206ENST00000358278 SYCP2LQ5T4T6 812 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms