RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 MTSS1O43312 755 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 RFPL2O75678 378 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 BTF3P20290 206 aaKnown RBP9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 ATICP31939 592 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 NUDT1P36639 197 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 ALDH7A1P49419 539 aaKnown RBP9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 ACOT2P49753 483 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 OSTNP61366 133 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 PRAMEP78395 509 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 MS4A2Q01362 244 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 RHAGQ02094 409 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 COX10Q12887 443 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 TAF5Q15542 800 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 RSBN1Q5VWQ0 802 aaPredicted RBP9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 SDE2Q6IQ49 451 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 C11orf63Q6NUN7 778 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 METTL3Q86U44 580 aaKnown RBP9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 ZNF786Q8N393 782 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 KCTD17Q8N5Z5 321 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 DNERQ8NFT8 737 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 RASSF5Q8WWW0 418 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 SH3KBP1Q96B97 665 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 GPRASP2Q96D09 838 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 CCDC120Q96HB5 630 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 VCPIP1Q96JH7 1222 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 MCMBPQ9BTE3 642 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 TIGARQ9NQ88 270 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 CHST12Q9NRB3 414 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 DUS2Q9NX74 493 aaKnown RBP9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 DNMT3LQ9UJW3 386 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 EIF3LQ9Y262 564 aaKnown RBP9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 TYW5A2RUC4 315 aaKnown RBP9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 FSCN2O14926 492 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 SH3BP5O60239 455 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 LPXNO60711 386 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 IL18RAPO95256 599 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 PSAPP07602 524 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 XRCC1P18887 633 aaPredicted RBP9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 FGFR3P22607 806 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 ADSSP30520 456 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 RRM2P31350 389 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 GPX6P59796 221 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 FCHO2Q0JRZ9 810 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 FAAP100Q0VG06 881 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 GRSF1Q12849 480 aaKnown RBP eCLIP9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 PPIGQ13427 754 aaKnown RBP eCLIP9.4□□□□□ -0.96e-7■■■■■ 27
SMARCAL1-202ENST00000358207 TAF12Q16514 161 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 EFHC2Q5JST6 749 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 SLC9A4Q6AI14 798 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 KCNT2Q6UVM3 1135 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 CDHR3Q6ZTQ4 885 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 ZNF354CQ86Y25 554 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 ZCCHC9Q8N567 271 aaKnown RBP9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 PDCD6IPQ8WUM4 868 aaKnown RBP9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 JPH3Q8WXH2 748 aaPredicted RBP9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 SNX19Q92543 992 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 SLC39A13Q96H72 371 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 ZBTB45Q96K62 511 aaPredicted RBP9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 KLHL32Q96NJ5 620 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 FIZ1Q96SL8 496 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 ACAT2Q9BWD1 397 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 TOPORSQ9NS56 1045 aaPredicted RBP9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 MAT2BQ9NZL9 334 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 SLC24A2Q9UI40 661 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 ITGA11Q9UKX5 1188 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 CNOT11Q9UKZ1 510 aaKnown RBP9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 TMCC3Q9ULS5 477 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 PCDHGA10Q9Y5H3 936 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 DGKBQ9Y6T7 804 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 MICAL3Q7RTP6 2002 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 ARVCFO00192 962 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 RNGTTO60942 597 aaKnown RBP9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 EPN2O95208 641 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 ATF4P18848 351 aaPredicted RBP9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 NPTX2P47972 431 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 STAT5BP51692 787 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 POLR2GP62487 172 aaKnown RBP eCLIP9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 KIZQ2M2Z5 673 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 TRIM60Q495X7 471 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 PSRC1Q6PGN9 363 aaPredicted RBP9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 ABHD15Q6UXT9 468 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 ATG14Q6ZNE5 492 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 CHST15Q7LFX5 561 aaPredicted RBP9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 ARMC8Q8IUR7 673 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 HID1Q8IV36 788 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 OR10Z1Q8NGY1 313 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 AFG1LQ8WV93 481 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 MARC2Q969Z3 335 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 DACT3Q96B18 629 aaPredicted RBP9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 SERAC1Q96JX3 654 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 DEPDC7Q96QD5 511 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 PCYT2Q99447 389 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 ZSCAN5AQ9BUG6 496 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 ANKRD60Q9BZ19 345 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 POLR3FQ9H1D9 316 aaPredicted RBP9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 ZNF229Q9UJW7 825 aa9.4□□□□□ -0.9
SMARCAL1-202ENST00000358207 CCDC195A0A1B0GUA6 201 aa9.4□□□□□ -0.91
SMARCAL1-202ENST00000358207 A0A1W2PQ72 361 aa9.4□□□□□ -0.91
SMARCAL1-202ENST00000358207 ANKRD62A6NC57 917 aa9.4□□□□□ -0.91
SMARCAL1-202ENST00000358207 TOR1BO14657 336 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms