RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 ZDHHC9Q9Y397 364 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 MED31Q9Y3C7 131 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 PCDHGB5Q9Y5G0 923 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 MROH7Q68CQ1 1323 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 BTBD19C9JJ37 291 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 RNASEH2AO75792 299 aaKnown RBP9.84□□□□□ -0.83
CHD3-202ENST00000358181 MNDAP41218 407 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 KCNJ1P48048 391 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 DNASE1L3Q13609 305 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 ATP8B4Q8TF62 1192 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 NAT14Q8WUY8 206 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 LRRC46Q96FV0 321 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 SLC38A2Q96QD8 506 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 AIFM2Q9BRQ8 373 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 LRRC1Q9BTT6 524 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 NKIRAS2Q9NYR9 191 aa9.84□□□□□ -0.83
CHD3-202ENST00000358181 TEX46H3BTG2 121 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 SERPINA1P01009 418 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 CCR1P32246 355 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 CDH11P55287 796 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 VBP1P61758 197 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 CYP2R1Q6VVX0 501 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 FRRS1Q6ZNA5 592 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 PPIL6Q8IXY8 311 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 SLC38A3Q99624 504 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 CELF4Q9BZC1 486 aaKnown RBP9.83□□□□□ -0.84
CHD3-202ENST00000358181 CCDC86Q9H6F5 360 aaKnown RBP9.83□□□□□ -0.84
CHD3-202ENST00000358181 VCPKMTQ9H867 229 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 SLC27A5Q9Y2P5 690 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 NCAPD2Q15021 1401 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 MBTD1Q05BQ5 628 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 ADIGQ0VDE8 80 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 PLGLAQ15195 96 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 OGFRL1Q5TC84 451 aaPredicted RBP9.83□□□□□ -0.84
CHD3-202ENST00000358181 DENND5AQ6IQ26 1287 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 SLC25A25Q6KCM7 469 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 RETSATQ6NUM9 610 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 TXNRD3Q86VQ6 643 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 ARHGEF19Q8IW93 802 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 FEZF2Q8TBJ5 459 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 TEX47Q8TBZ9 253 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 CEP295NLQ96MC4 621 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 CRAMP1Q96RY5 1269 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 APOL4Q9BPW4 351 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 DLGAP2Q9P1A6 1054 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 OPTCQ9UBM4 332 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 GSC2O15499 205 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 USP17L7P0C7H9 530 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 TPBGLP0DKB5 382 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 ASMTP46597 345 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 MARC1Q5VT66 337 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 C11orf63Q6NUN7 778 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 TTI2Q6NXR4 508 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 TERB1Q8NA31 727 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 GRAMD1AQ96CP6 724 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 PRICKLE1Q96MT3 831 aaPredicted RBP9.83□□□□□ -0.84
CHD3-202ENST00000358181 NOD2Q9HC29 1040 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 TBC1D13Q9NVG8 400 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 CARD8Q9Y2G2 431 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 TMEM150BA6NC51 233 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 CDH3P22223 829 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 LHX1P48742 406 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 C4orf22Q6V702 233 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 THAP5Q7Z6K1 395 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 FOXRED2Q8IWF2 684 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 SYNPOQ8N3V7 929 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 DHRSXQ8N5I4 330 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 TCEANCQ8N8B7 351 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 METTL6Q8TCB7 284 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 KLK6Q92876 244 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 PLGRKTQ9HBL7 147 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 SMG5Q9UPR3 1016 aaKnown RBP9.83□□□□□ -0.84
CHD3-202ENST00000358181 AXIN1O15169 862 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 SGTAO43765 313 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 GATBO75879 557 aaKnown RBP9.83□□□□□ -0.84
CHD3-202ENST00000358181 APODP05090 189 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 SLC35G4P0C7Q5 338 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 GNSP15586 552 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 TMEM11P17152 192 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 BDNFP23560 247 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 ANTXR2P58335 489 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 METTL7BQ6UX53 244 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 PHYKPLQ8IUZ5 450 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 C12orf56Q8IXR9 622 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 TTC29Q8NA56 475 aaPredicted RBP9.83□□□□□ -0.84
CHD3-202ENST00000358181 ZNF579Q8NAF0 562 aaKnown RBP9.83□□□□□ -0.84
CHD3-202ENST00000358181 COLGALT1Q8NBJ5 622 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 LRRC20Q8TCA0 184 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 SNX33Q8WV41 574 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 COPS7AQ9UBW8 275 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 AP4S1Q9Y587 144 aa9.83□□□□□ -0.84
CHD3-202ENST00000358181 WASHC1A8K0Z3 465 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 WASH3PC4AMC7 463 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 PLOD2O00469 737 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 OR10H3O60404 316 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 TULP3O75386 442 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 VIPP01282 170 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 C9P02748 559 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 CDC25CP30307 473 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 MZT2BQ6NZ67 158 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms