RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 ALS2CR12Q96Q35 445 aa4.03□□□□□ -1.76
CNOT4-202ENST00000356162 FAM129BQ96TA1 746 aa4.03□□□□□ -1.76
CNOT4-202ENST00000356162 HEPHQ9BQS7 1158 aa4.03□□□□□ -1.76
CNOT4-202ENST00000356162 CINPQ9BW66 212 aaPredicted RBP4.03□□□□□ -1.76
CNOT4-202ENST00000356162 OSBPL1AQ9BXW6 950 aa4.03□□□□□ -1.76
CNOT4-202ENST00000356162 ZCCHC2Q9C0B9 1178 aaKnown RBP4.03□□□□□ -1.76
CNOT4-202ENST00000356162 BRD8Q9H0E9 1235 aa4.03□□□□□ -1.76
CNOT4-202ENST00000356162 SLC6A17Q9H1V8 727 aa4.03□□□□□ -1.76
CNOT4-202ENST00000356162 GOLPH3Q9H4A6 298 aa4.03□□□□□ -1.76
CNOT4-202ENST00000356162 MTG2Q9H4K7 406 aa4.03□□□□□ -1.76
CNOT4-202ENST00000356162 ITM2CQ9NQX7 267 aa4.03□□□□□ -1.76
CNOT4-202ENST00000356162 HAUS2Q9NVX0 235 aa4.03□□□□□ -1.76
CNOT4-202ENST00000356162 TRIM10Q9UDY6 481 aa4.03□□□□□ -1.76
CNOT4-202ENST00000356162 SEPT3Q9UH03 358 aa4.03□□□□□ -1.76
CNOT4-202ENST00000356162 IL36AQ9UHA7 158 aa4.03□□□□□ -1.76
CNOT4-202ENST00000356162 IPO11Q9UI26 975 aaKnown RBP4.03□□□□□ -1.76
CNOT4-202ENST00000356162 MBD1Q9UIS9 605 aaPredicted RBP4.03□□□□□ -1.76
CNOT4-202ENST00000356162 NCKAP1Q9Y2A7 1128 aa4.03□□□□□ -1.76
CNOT4-202ENST00000356162 HYOU1Q9Y4L1 999 aa4.03□□□□□ -1.76
CNOT4-202ENST00000356162 PCDHGC4Q9Y5F7 938 aa4.03□□□□□ -1.76
CNOT4-202ENST00000356162 PCDHGA5Q9Y5G8 931 aa4.03□□□□□ -1.76
CNOT4-202ENST00000356162 SPAG17Q6Q759 2223 aa4.03□□□□□ -1.76
CNOT4-202ENST00000356162 hCG_1818297A0A087WSY0 165 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 A0A1W2PNR3 127 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 TSPAN11A1L157 253 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 PPP1R12AO14974 1030 aaPredicted RBP4.03□□□□□ -1.77
CNOT4-202ENST00000356162 SMAD6O43541 496 aaKnown RBP4.03□□□□□ -1.77
CNOT4-202ENST00000356162 LRP3O75074 770 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 NDUFS2O75306 463 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 ZNF821O75541 412 aaPredicted RBP4.03□□□□□ -1.77
CNOT4-202ENST00000356162 PALMO75781 387 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 TNNT1P13805 278 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 ITGB7P26010 798 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 HOXD12P35452 270 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 CETN2P41208 172 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 GARSP41250 739 aaKnown RBP4.03□□□□□ -1.77
CNOT4-202ENST00000356162 MARCKSL1P49006 195 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 NUMBP49757 651 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 TPMTP51580 245 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 CCNHP51946 323 aaPredicted RBP4.03□□□□□ -1.77
CNOT4-202ENST00000356162 RWDD2BP57060 319 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 AP1S1P61966 158 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 CCDC15Q0P6D6 951 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 SRSF5Q13243 272 aaKnown RBP4.03□□□□□ -1.77
CNOT4-202ENST00000356162 ZNF235Q14590 738 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 CYTH1Q15438 398 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 RALGPS1Q5JS13 557 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 PEAR1Q5VY43 1037 aaPredicted RBP4.03□□□□□ -1.77
CNOT4-202ENST00000356162 MFSD7Q6UXD7 560 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 DPY19L3Q6ZPD9 716 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 ARHGAP36Q6ZRI8 547 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 PEX26Q7Z412 305 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 RABEPKQ7Z6M1 372 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 CACUL1Q86Y37 369 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 MMAAQ8IVH4 418 aaKnown RBP4.03□□□□□ -1.77
CNOT4-202ENST00000356162 PLD5Q8N7P1 536 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 KIAA1524Q8TCG1 905 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 ZDHHC1Q8WTX9 485 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 MAML1Q92585 1016 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 KRT35Q92764 455 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 ARRDC3Q96B67 414 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 OLFM3Q96PB7 478 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 TSGA13Q96PP4 275 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 TUBGCP5Q96RT8 1024 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 MGME1Q9BQP7 344 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 MAK16Q9BXY0 300 aaKnown RBP4.03□□□□□ -1.77
CNOT4-202ENST00000356162 TM6SF2Q9BZW4 377 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 DUSP15Q9H1R2 295 aaPredicted RBP4.03□□□□□ -1.77
CNOT4-202ENST00000356162 TNKS2Q9H2K2 1166 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 DYRK4Q9NR20 520 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 WSB2Q9NYS7 404 aaPredicted RBP4.03□□□□□ -1.77
CNOT4-202ENST00000356162 AMACRQ9UHK6 382 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 PPM1HQ9ULR3 514 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 EFR3BQ9Y2G0 817 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 PPP2R2CQ9Y2T4 447 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 PCDHA3Q9Y5H8 950 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 CAPN6Q9Y6Q1 641 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 DUSP10Q9Y6W6 482 aa4.03□□□□□ -1.77
CNOT4-202ENST00000356162 THADAQ6YHU6 1953 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 NUP205Q92621 2012 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 TP53BP1Q12888 1972 aaPredicted RBP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 A0A0U1RQJ8 604 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 A0A1W2PP55 124 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 LRRC72A6NJI9 287 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 MEI4A8MW99 385 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 C10orf142B7Z368 130 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 J3KR12 359 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 DDX3YO15523 660 aaKnown RBP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 PLRG1O43660 514 aaKnown RBP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 MAFKO60675 156 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 ZRANB2O95218 330 aaKnown RBP eCLIP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 POP4O95707 220 aaKnown RBP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 SEMA4FO95754 770 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 FTCDO95954 541 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 PEX11BO96011 259 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 IL1BP01584 269 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 CTSLP07711 333 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 RETP07949 1114 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 CCNCP24863 283 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 SLC8A1P32418 973 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms