RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 ERICH4A6NGS2 130 aa23.05■■□□□ 1.28
SCAMP3-202ENST00000355379 TIMM44O43615 452 aa23.05■■□□□ 1.28
SCAMP3-202ENST00000355379 GJB3O75712 270 aa23.05■■□□□ 1.28
SCAMP3-202ENST00000355379 NUMBP49757 651 aa23.05■■□□□ 1.28
SCAMP3-202ENST00000355379 ZNF77Q15935 545 aa23.05■■□□□ 1.28
SCAMP3-202ENST00000355379 RETSATQ6NUM9 610 aa23.05■■□□□ 1.28
SCAMP3-202ENST00000355379 CPLX4Q7Z7G2 160 aa23.05■■□□□ 1.28
SCAMP3-202ENST00000355379 METTL3Q86U44 580 aaKnown RBP23.05■■□□□ 1.28
SCAMP3-202ENST00000355379 LRRC34Q8IZ02 419 aa23.05■■□□□ 1.28
SCAMP3-202ENST00000355379 NSRP1Q9H0G5 558 aaKnown RBP23.05■■□□□ 1.28
SCAMP3-202ENST00000355379 TLE6Q9H808 572 aa23.05■■□□□ 1.28
SCAMP3-202ENST00000355379 RIMKLBQ9ULI2 386 aa23.05■■□□□ 1.28
SCAMP3-202ENST00000355379 WEE1P30291 646 aa23.04■■□□□ 1.28
SCAMP3-202ENST00000355379 CRHR1P34998 444 aa23.04■■□□□ 1.28
SCAMP3-202ENST00000355379 HADHAP40939 763 aa23.04■■□□□ 1.28
SCAMP3-202ENST00000355379 SCNN1BP51168 640 aa23.04■■□□□ 1.28
SCAMP3-202ENST00000355379 SLC20A2Q08357 652 aa23.04■■□□□ 1.28
SCAMP3-202ENST00000355379 LMAN2Q12907 356 aa23.04■■□□□ 1.28
SCAMP3-202ENST00000355379 PDK4Q16654 411 aa23.04■■□□□ 1.28
SCAMP3-202ENST00000355379 UGP2Q16851 508 aa23.04■■□□□ 1.28
SCAMP3-202ENST00000355379 ZNF697Q5TEC3 545 aa23.04■■□□□ 1.28
SCAMP3-202ENST00000355379 TPGS1Q6ZTW0 290 aa23.04■■□□□ 1.28
SCAMP3-202ENST00000355379 RBM23Q86U06 439 aaKnown RBP23.04■■□□□ 1.28
SCAMP3-202ENST00000355379 APCDD1Q8J025 514 aa23.04■■□□□ 1.28
SCAMP3-202ENST00000355379 KIAA1958Q8N8K9 716 aa23.04■■□□□ 1.28
SCAMP3-202ENST00000355379 ZNF557Q8N988 423 aaPredicted RBP23.04■■□□□ 1.28
SCAMP3-202ENST00000355379 GABPB2Q8TAK5 448 aaPredicted RBP23.04■■□□□ 1.28
SCAMP3-202ENST00000355379 RIN3Q8TB24 985 aa23.04■■□□□ 1.28
SCAMP3-202ENST00000355379 OTUB2Q96DC9 234 aa23.04■■□□□ 1.28
SCAMP3-202ENST00000355379 LMLNQ96KR4 655 aa23.04■■□□□ 1.28
SCAMP3-202ENST00000355379 PAIP2Q9BPZ3 127 aaKnown RBP23.04■■□□□ 1.28
SCAMP3-202ENST00000355379 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 TCP11X1B4DZS4 312 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 VAPBO95292 243 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 PENKP01210 267 aaPredicted RBP23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 VIMP08670 466 aaKnown RBP23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 DHRS4L1P0CG22 281 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 ARNTP27540 789 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 PBX2P40425 430 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 ETV4P43268 484 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 MAGEA12P43365 314 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 CCT5P48643 541 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 CNGA3Q16281 694 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 NCEH1Q6PIU2 408 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 LINGO4Q6UY18 593 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 NSMCE3Q96MG7 304 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 SRPK1Q96SB4 655 aaKnown RBP23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 FAM167BQ9BTA0 163 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 TDRD1Q9BXT4 1180 aaKnown RBP23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 IQCGQ9H095 443 aaKnown RBP23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 VPS11Q9H270 941 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 SLC2A6Q9UGQ3 507 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 CCDC78A2IDD5 438 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 ALDOAP04075 364 aaKnown RBP23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 TAC1P20366 129 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 FOXN2P32314 431 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 PDE1BQ01064 536 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 ACVR1Q04771 509 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 THOC5Q13769 683 aaKnown RBP23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 RAB30Q15771 203 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 NDUFAF2Q8N183 169 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 CALML6Q8TD86 181 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 BRSK1Q8TDC3 778 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 BHMTQ93088 406 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 PBX4Q9BYU1 374 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 PIDD1Q9HB75 910 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 ABCB8Q9NUT2 735 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 SLC17A7Q9P2U7 560 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 MSRAQ9UJ68 235 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 GRID1Q9ULK0 1009 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 PLLPQ9Y342 182 aa23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 MRPS23Q9Y3D9 190 aaKnown RBP23.03■■□□□ 1.28
SCAMP3-202ENST00000355379 TPP1O14773 563 aa23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 SLC7A4O43246 635 aa23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 LDB2O43679 373 aa23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 PRAMEF12O95522 483 aa23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 CEBPBP17676 345 aa23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 CSNK1DP48730 415 aa23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 POLD2P49005 469 aa23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 SERPINB8P50452 374 aa23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 RHOAP61586 193 aa23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 QPCTQ16769 361 aa23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 PLEKHG6Q3KR16 790 aa23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 GLIPR1L2Q4G1C9 344 aa23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 KIAA0408Q6ZU52 694 aa23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 LMNTD2Q8IXW0 634 aa23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 DCLK2Q8N568 766 aa23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 SMG7Q92540 1137 aaKnown RBP23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 IRF7Q92985 503 aa23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 CABS1Q96KC9 395 aa23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 EXOC2Q96KP1 924 aa23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 FAM107BQ9H098 131 aa23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 NKX2-4Q9H2Z4 354 aa23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 RHOJQ9H4E5 214 aa23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 PLK2Q9NYY3 685 aa23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 CLEC4EQ9ULY5 219 aa23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 RAI2Q9Y5P3 530 aa23.02■■□□□ 1.28
SCAMP3-202ENST00000355379 SLC9A3R1O14745 358 aaPredicted RBP23.01■■□□□ 1.27
SCAMP3-202ENST00000355379 CD70P32970 193 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms