RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 ASIC5Q9NY37 505 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 SELENONQ9NZV5 590 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 XDHP47989 1333 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 PTPRUQ92729 1446 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 PLA2R1Q13018 1463 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 LOC102723996A0A087X1L8 192 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 BICDL2A1A5D9 508 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 HSPB2A8KAH6 182 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 CLIC1O00299 241 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 TSPAN15O95858 294 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 ADH4P08319 380 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 APEHP13798 732 aaKnown RBP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 ATP6V1B1P15313 513 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 JUNBP17275 347 aaPredicted RBP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 DRD4P21917 467 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 CD86P42081 329 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 CRKLP46109 303 aaKnown RBP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 CLCN5P51795 746 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 EIF3BP55884 814 aaKnown RBP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 HDAC4P56524 1084 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 PPP2CBP62714 309 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 PPP2CAP67775 309 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 RBP5P82980 135 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 GRAPQ13588 217 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 SNTB1Q13884 538 aaKnown RBP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 RNPS1Q15287 305 aaKnown RBP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 HSPB2Q16082 182 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 RPE65Q16518 533 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 SERTAD4-AS1Q5TG53 156 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 LCTLQ6UWM7 567 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 NAPRTQ6XQN6 538 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 PTCHD4Q6ZW05 846 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 GALNT7Q86SF2 657 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 ULK2Q8IYT8 1036 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 MSANTD4Q8NCY6 345 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 OR8H1Q8NGG4 311 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 KCNE4Q8WWG9 221 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 C5orf34Q96MH7 638 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 FIZ1Q96SL8 496 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 STRA6Q9BX79 667 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 PCDH18Q9HCL0 1135 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 RANGRFQ9HD47 186 aaPredicted RBP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 P4HTMQ9NXG6 502 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 RNF181Q9P0P0 153 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 ANKFY1Q9P2R3 1169 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 OSGIN2Q9Y236 505 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 DNHD1Q96M86 4753 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 AOX1Q06278 1338 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 ASH1LQ9NR48 2969 aaKnown RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 GPRASP1Q5JY77 1395 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 EIF3CLB5ME19 914 aaKnown RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 EXOC3O60645 756 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 C1RP00736 705 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 PRR35P0CG20 571 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 MYBL1P10243 752 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 ANXA7P20073 488 aaKnown RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 GSTM2P28161 218 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 GP5P40197 560 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 HNF4AP41235 474 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 RPS6KA3P51812 740 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 CDH13P55290 713 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 LINC00310P59036 64 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 CYP4F2P78329 520 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 TMF1P82094 1093 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 GRSF1Q12849 480 aaKnown RBP eCLIP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 CBFBQ13951 182 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 ST3GAL2Q16842 350 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 CDONQ4KMG0 1287 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 LBHQ53QV2 105 aaPredicted RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 KCNT1Q5JUK3 1230 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 MEX3CQ5U5Q3 659 aaKnown RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 TBC1D9BQ66K14 1250 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 TXNDC8Q6A555 127 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 RANBP10Q6VN20 620 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 PPP1R21Q6ZMI0 780 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 ARHGEF18Q6ZSZ5 1173 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 CCDC91Q7Z6B0 441 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 TADA2BQ86TJ2 420 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 DNAAF5Q86Y56 855 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 MMP21Q8N119 569 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 SLC44A3Q8N4M1 653 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 SIRT6Q8N6T7 355 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 PIGOQ8TEQ8 1089 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 MR1Q95460 341 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 SMARCE1Q969G3 411 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 CCDC34Q96HJ3 373 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 SPATA17Q96L03 361 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 NLRP4Q96MN2 994 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 OR2A14Q96R47 310 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 SNX18Q96RF0 628 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 BBS4Q96RK4 519 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 CDRT15Q96T59 188 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 SYT17Q9BSW7 474 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 NPLQ9BXD5 320 aaPredicted RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 C1QTNF1Q9BXJ1 281 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 EDEM3Q9BZQ6 932 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 RABEP2Q9H5N1 569 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 DDX4Q9NQI0 724 aaKnown RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 SLC35C2Q9NQQ7 365 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 IL17RBQ9NRM6 502 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms