RNA–Protein interactions for RNA: ENST00000347739.3

TNFRSF10B-202, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-202ENST00000347739 CCL16O15467 120 aa22.7■■□□□ 1.22
TNFRSF10B-202ENST00000347739 INSIG1O15503 277 aa22.7■■□□□ 1.22
TNFRSF10B-202ENST00000347739 MYL4P12829 197 aa22.7■■□□□ 1.22
TNFRSF10B-202ENST00000347739 BGNP21810 368 aa22.7■■□□□ 1.22
TNFRSF10B-202ENST00000347739 THOC5Q13769 683 aaKnown RBP22.7■■□□□ 1.22
TNFRSF10B-202ENST00000347739 INO80DQ53TQ3 878 aaPredicted RBP22.7■■□□□ 1.22
TNFRSF10B-202ENST00000347739 FSCBQ5H9T9 825 aa22.7■■□□□ 1.22
TNFRSF10B-202ENST00000347739 OTUD6BQ8N6M0 293 aa22.7■■□□□ 1.22
TNFRSF10B-202ENST00000347739 CALML6Q8TD86 181 aa22.7■■□□□ 1.22
TNFRSF10B-202ENST00000347739 SLC22A17Q8WUG5 538 aa22.7■■□□□ 1.22
TNFRSF10B-202ENST00000347739 FEM1AQ9BSK4 669 aa22.7■■□□□ 1.22
TNFRSF10B-202ENST00000347739 NOD2Q9HC29 1040 aa22.7■■□□□ 1.22
TNFRSF10B-202ENST00000347739 CFAP97Q9P2B7 532 aa22.7■■□□□ 1.22
TNFRSF10B-202ENST00000347739 EMCNQ9ULC0 261 aa22.7■■□□□ 1.22
TNFRSF10B-202ENST00000347739 PLIN3O60664 434 aa22.69■■□□□ 1.22
TNFRSF10B-202ENST00000347739 NDST3O95803 873 aa22.69■■□□□ 1.22
TNFRSF10B-202ENST00000347739 CD160O95971 181 aa22.69■■□□□ 1.22
TNFRSF10B-202ENST00000347739 AHSGP02765 367 aa22.69■■□□□ 1.22
TNFRSF10B-202ENST00000347739 BPGMP07738 259 aa22.69■■□□□ 1.22
TNFRSF10B-202ENST00000347739 GABRB3P28472 473 aa22.69■■□□□ 1.22
TNFRSF10B-202ENST00000347739 RGRP47804 291 aa22.69■■□□□ 1.22
TNFRSF10B-202ENST00000347739 NUMBP49757 651 aa22.69■■□□□ 1.22
TNFRSF10B-202ENST00000347739 ACVR1Q04771 509 aa22.69■■□□□ 1.22
TNFRSF10B-202ENST00000347739 N4BP2L1Q5TBK1 243 aaPredicted RBP22.69■■□□□ 1.22
TNFRSF10B-202ENST00000347739 RNF43Q68DV7 783 aa22.69■■□□□ 1.22
TNFRSF10B-202ENST00000347739 CMC1Q7Z7K0 106 aa22.69■■□□□ 1.22
TNFRSF10B-202ENST00000347739 OR13J1Q8NGT2 312 aa22.69■■□□□ 1.22
TNFRSF10B-202ENST00000347739 ATXN7L3BQ96GX2 97 aa22.69■■□□□ 1.22
TNFRSF10B-202ENST00000347739 NUDCD1Q96RS6 583 aa22.69■■□□□ 1.22
TNFRSF10B-202ENST00000347739 TSSK1BQ9BXA7 367 aa22.69■■□□□ 1.22
TNFRSF10B-202ENST00000347739 KLHL14Q9P2G3 628 aa22.69■■□□□ 1.22
TNFRSF10B-202ENST00000347739 RIMKLBQ9ULI2 386 aa22.69■■□□□ 1.22
TNFRSF10B-202ENST00000347739 ARHGAP26Q9UNA1 814 aa22.69■■□□□ 1.22
TNFRSF10B-202ENST00000347739 NRG2O14511 850 aaPredicted RBP22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 SCAMP3O14828 347 aaKnown RBP22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 LDB2O43679 373 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 TOP3BO95985 862 aaKnown RBP22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 DDX6P26196 483 aaKnown RBP eCLIP22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 MZF1P28698 734 aaPredicted RBP22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 HOXA9P31269 272 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 SLC1A2P43004 574 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 NSUN2Q08J23 767 aaKnown RBP eCLIP22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 SF3A3Q12874 501 aaKnown RBP eCLIP22.68■■□□□ 1.221e-9■■■□□ 18.9
TNFRSF10B-202ENST00000347739 CDH18Q13634 790 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 NEPROQ6NW34 567 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 TRPM8Q7Z2W7 1104 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 GALNT7Q86SF2 657 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 CLEC14AQ86T13 490 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 DCAF4L2Q8NA75 395 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 ALG14Q96F25 216 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 SLC46A2Q9BY10 475 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 DNMT3BQ9UBC3 853 aaKnown RBP22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 GGT7Q9UJ14 662 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 SLC7A4O43246 635 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 GSRP00390 522 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 NEFHP12036 1026 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 GRM3Q14832 879 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 MPPE1Q53F39 396 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 LACTB2Q53H82 288 aaPredicted RBP22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 PPM1JQ5JR12 505 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 RNF187Q5TA31 235 aaPredicted RBP22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 FYB2Q5VWT5 728 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 ATG16L1Q676U5 607 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 NUDCD3Q8IVD9 361 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 DENND6AQ8IWF6 608 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 LMNTD2Q8IXW0 634 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 TDRD5Q8NAT2 981 aaKnown RBP22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 C17orf80Q9BSJ5 609 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 SCUBE2Q9NQ36 999 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 VPS28Q9UK41 221 aa22.68■■□□□ 1.22
TNFRSF10B-202ENST00000347739 A0A096LPK6 155 aa22.67■■□□□ 1.22
TNFRSF10B-202ENST00000347739 LEFTY2O00292 366 aa22.67■■□□□ 1.22
TNFRSF10B-202ENST00000347739 TMCC1O94876 653 aa22.67■■□□□ 1.22
TNFRSF10B-202ENST00000347739 RB1P06400 928 aa22.67■■□□□ 1.22
TNFRSF10B-202ENST00000347739 GJA1P17302 382 aa22.67■■□□□ 1.22
TNFRSF10B-202ENST00000347739 CCR2P41597 374 aa22.67■■□□□ 1.22
TNFRSF10B-202ENST00000347739 SCNN1BP51168 640 aa22.67■■□□□ 1.22
TNFRSF10B-202ENST00000347739 CCDC153Q494R4 210 aa22.67■■□□□ 1.22
TNFRSF10B-202ENST00000347739 ZNF470Q6ECI4 717 aa22.67■■□□□ 1.22
TNFRSF10B-202ENST00000347739 LCA5Q86VQ0 697 aa22.67■■□□□ 1.22
TNFRSF10B-202ENST00000347739 BBS7Q8IWZ6 715 aa22.67■■□□□ 1.22
TNFRSF10B-202ENST00000347739 ZNF398Q8TD17 642 aa22.67■■□□□ 1.22
TNFRSF10B-202ENST00000347739 BRSK1Q8TDC3 778 aa22.67■■□□□ 1.22
TNFRSF10B-202ENST00000347739 E2F7Q96AV8 911 aa22.67■■□□□ 1.22
TNFRSF10B-202ENST00000347739 MECRQ9BV79 373 aa22.67■■□□□ 1.22
TNFRSF10B-202ENST00000347739 MFSD1Q9H3U5 465 aa22.67■■□□□ 1.22
TNFRSF10B-202ENST00000347739 MAN1C1Q9NR34 630 aa22.67■■□□□ 1.22
TNFRSF10B-202ENST00000347739 FBXO5Q9UKT4 447 aa22.67■■□□□ 1.22
TNFRSF10B-202ENST00000347739 ANKRD6Q9Y2G4 727 aa22.67■■□□□ 1.22
TNFRSF10B-202ENST00000347739 SOBPA7XYQ1 873 aa22.66■■□□□ 1.22
TNFRSF10B-202ENST00000347739 SNAP91O60641 907 aa22.66■■□□□ 1.22
TNFRSF10B-202ENST00000347739 TGDSO95455 350 aa22.66■■□□□ 1.22
TNFRSF10B-202ENST00000347739 PROCP04070 461 aa22.66■■□□□ 1.22
TNFRSF10B-202ENST00000347739 F7P08709 466 aaPredicted RBP22.66■■□□□ 1.22
TNFRSF10B-202ENST00000347739 TROVE2P10155 538 aaKnown RBP eCLIP22.66■■□□□ 1.22
TNFRSF10B-202ENST00000347739 SYN1P17600 705 aa22.66■■□□□ 1.22
TNFRSF10B-202ENST00000347739 CSKP41240 450 aa22.66■■□□□ 1.22
TNFRSF10B-202ENST00000347739 MPP1Q00013 466 aa22.66■■□□□ 1.22
TNFRSF10B-202ENST00000347739 CTBP1Q13363 440 aa22.66■■□□□ 1.22
TNFRSF10B-202ENST00000347739 MFN1Q8IWA4 741 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms