RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 GPD2P43304 727 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 PKNOX1P55347 436 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 TTMPQ5BVD1 217 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 TNFAIP8L1Q8WVP5 186 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 FAM84BQ96KN1 310 aaPredicted RBP19.51■□□□□ 0.71
HDAC4-201ENST00000345617 NUP50Q9UKX7 468 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 TARBP1Q13395 1621 aaKnown RBP19.51■□□□□ 0.71
HDAC4-201ENST00000345617 MSH4O15457 936 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 ARL15Q9NXU5 204 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 ANXA8L1Q5VT79 327 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 TFR2Q9UP52 801 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 GIT1Q9Y2X7 761 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 H0YJX3 145 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 OTCP00480 354 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 TFRCP02786 760 aaKnown RBP19.51■□□□□ 0.71
HDAC4-201ENST00000345617 RLN1P04808 185 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 TYMPP19971 482 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 CLCN5P51795 746 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 CRY1Q16526 586 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 HLFQ16534 295 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 CNSTQ6PJW8 725 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 DSG4Q86SJ6 1040 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 C18orf25Q96B23 403 aaPredicted RBP19.51■□□□□ 0.71
HDAC4-201ENST00000345617 ZNF224Q9NZL3 707 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 PCDHGA3Q9Y5H0 932 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 UGT2B17O75795 530 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 PIGNO95427 931 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 PITPNAQ00169 270 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 USP45Q70EL2 814 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 ATG9AQ7Z3C6 839 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 ACSF2Q96CM8 615 aaPredicted RBP19.51■□□□□ 0.71
HDAC4-201ENST00000345617 XPNPEP3Q9NQH7 507 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 KPNA3O00505 521 aaPredicted RBP19.5■□□□□ 0.71
HDAC4-201ENST00000345617 HMGCS2P54868 508 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 GIT2Q14161 759 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 TTYH1Q9H313 450 aaPredicted RBP19.5■□□□□ 0.71
HDAC4-201ENST00000345617 ARHGAP20Q9P2F6 1191 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 PCDHGB3Q9Y5G1 929 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 TTC3P53804 2025 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 ULK1O75385 1050 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 PCBP1Q15365 356 aaKnown RBP eCLIP19.5■□□□□ 0.711e-6■■■■■ 29.1
HDAC4-201ENST00000345617 MED22Q15528 200 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 TDRD3Q9H7E2 651 aaKnown RBP19.5■□□□□ 0.71
HDAC4-201ENST00000345617 PLCL2Q9UPR0 1127 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 NCANO14594 1321 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 SLC22A2O15244 555 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 STAG3L1P0CL83 205 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 PEX6Q13608 980 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 SLC9A4Q6AI14 798 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 CLDN25C9JDP6 229 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 RGS1Q08116 209 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 FAM153CQ494X1 144 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 PPM1LQ5SGD2 360 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 INO80EQ8NBZ0 244 aaPredicted RBP19.5■□□□□ 0.71
HDAC4-201ENST00000345617 RXFP2Q8WXD0 754 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 RBM22Q9NW64 420 aaKnown RBP eCLIP19.5■□□□□ 0.713e-6■■■□□ 17.4
HDAC4-201ENST00000345617 SCAF8Q9UPN6 1271 aaKnown RBP19.5■□□□□ 0.71
HDAC4-201ENST00000345617 MAN2B2Q9Y2E5 1009 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 TFECO14948 347 aaPredicted RBP19.5■□□□□ 0.71
HDAC4-201ENST00000345617 MMP10P09238 476 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 NFKB1P19838 968 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 NPR2P20594 1047 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 GRIA4P48058 902 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 HUNKP57058 714 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 S100A12P80511 92 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 ELAVL2Q12926 359 aaKnown RBP19.5■□□□□ 0.71
HDAC4-201ENST00000345617 PDCD4Q53EL6 469 aaKnown RBP19.5■□□□□ 0.71
HDAC4-201ENST00000345617 LRRC20Q8TCA0 184 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 AKAP1Q92667 903 aaKnown RBP eCLIP19.5■□□□□ 0.71
HDAC4-201ENST00000345617 CCDC177Q9NQR7 707 aaPredicted RBP19.5■□□□□ 0.71
HDAC4-201ENST00000345617 MEMO1Q9Y316 297 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 FAM205CA6NFA0 338 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 IFNA6P05013 189 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 PLCZ1Q86YW0 608 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 ITGA3P26006 1051 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 GABRB2P47870 512 aa19.5■□□□□ 0.71
HDAC4-201ENST00000345617 ACAP2Q15057 778 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 RETSATQ6NUM9 610 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 ACOT1Q86TX2 421 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 FAM86C2PA6NEL3 165 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 CTDNEP1O95476 244 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 RAB27AP51159 221 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 IL18R1Q13478 541 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 SUZ12Q15022 739 aaKnown RBP19.49■□□□□ 0.71
HDAC4-201ENST00000345617 EPC2Q52LR7 807 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 CASKO14936 926 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 SSTR1P30872 391 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 MRPS31Q92665 395 aaKnown RBP19.49■□□□□ 0.71
HDAC4-201ENST00000345617 SMPD3Q9NY59 655 aaPredicted RBP19.49■□□□□ 0.71
HDAC4-201ENST00000345617 BCKDKO14874 412 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 PSIP1O75475 530 aaKnown RBP19.49■□□□□ 0.71
HDAC4-201ENST00000345617 MGAT1P26572 445 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 ERP29P30040 261 aaKnown RBP19.49■□□□□ 0.71
HDAC4-201ENST00000345617 MTMR8Q96EF0 704 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 APBA2Q99767 749 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 ZFYVE28Q9HCC9 887 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 PRDX6P30041 224 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 ACVR2BQ13705 512 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 GCNT7Q6ZNI0 430 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 COG5Q9UP83 839 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms