RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 ZNF211Q13398 564 aaPredicted RBP20.27■□□□□ 0.84
CEACAM3-201ENST00000344550 NFKBIBQ15653 356 aa20.27■□□□□ 0.84
CEACAM3-201ENST00000344550 SMAD1Q15797 465 aaKnown RBP20.27■□□□□ 0.84
CEACAM3-201ENST00000344550 CCDC122Q5T0U0 273 aa20.27■□□□□ 0.84
CEACAM3-201ENST00000344550 Q6ZSR6 202 aa20.27■□□□□ 0.84
CEACAM3-201ENST00000344550 POLNQ7Z5Q5 900 aa20.27■□□□□ 0.84
CEACAM3-201ENST00000344550 PNPLA1Q8N8W4 532 aa20.27■□□□□ 0.84
CEACAM3-201ENST00000344550 OR13H1Q8NG92 308 aa20.27■□□□□ 0.84
CEACAM3-201ENST00000344550 SPOCK2Q92563 424 aa20.27■□□□□ 0.84
CEACAM3-201ENST00000344550 TSC1Q92574 1164 aa20.27■□□□□ 0.84
CEACAM3-201ENST00000344550 KLK6Q92876 244 aa20.27■□□□□ 0.84
CEACAM3-201ENST00000344550 BMFQ96LC9 184 aa20.27■□□□□ 0.84
CEACAM3-201ENST00000344550 KLF6Q99612 283 aaPredicted RBP20.27■□□□□ 0.84
CEACAM3-201ENST00000344550 DNAJC7Q99615 494 aa20.27■□□□□ 0.84
CEACAM3-201ENST00000344550 NUP85Q9BW27 656 aa20.27■□□□□ 0.84
CEACAM3-201ENST00000344550 SUV39H2Q9H5I1 410 aa20.27■□□□□ 0.84
CEACAM3-201ENST00000344550 ZNHIT6Q9NWK9 470 aaKnown RBP20.27■□□□□ 0.84
CEACAM3-201ENST00000344550 UVRAGQ9P2Y5 699 aa20.27■□□□□ 0.84
CEACAM3-201ENST00000344550 ANAPC7Q9UJX3 599 aa20.27■□□□□ 0.84
CEACAM3-201ENST00000344550 NENFQ9UMX5 172 aa20.27■□□□□ 0.84
CEACAM3-201ENST00000344550 SPTY2D1-AS1A0A0U1RR47 76 aa20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 A0A1W2PQ67 120 aa20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 SSU72P8A0A1W2PR75 194 aa20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 NEMP2A6NFY4 417 aa20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 IGLON5A6NGN9 336 aa20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 C1QTNF9BB2RNN3 333 aa20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 J3KR12 359 aa20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 TPM1P09493 284 aa20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 C1QTNF9P0C862 333 aa20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 TIMP2P16035 220 aa20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 IL1R2P27930 398 aa20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 SERPINB6P35237 376 aa20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 HNRNPKP61978 463 aaKnown RBP eCLIP20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 YPEL5P62699 121 aa20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 POLR2LP62875 67 aaKnown RBP20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 FGL2Q14314 439 aa20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 SLC18A3Q16572 532 aa20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 HADHQ16836 314 aaKnown RBP20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 TSR1Q2NL82 804 aaKnown RBP20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 TMEM52BQ4KMG9 183 aa20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 HS1BP3Q53T59 392 aa20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 TMCO3Q6UWJ1 677 aa20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 TMPRSS12Q86WS5 348 aa20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 CELF6Q96J87 481 aaKnown RBP20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 CNDP2Q96KP4 475 aaKnown RBP20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 PSKH2Q96QS6 385 aa20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 ATP13A3Q9H7F0 1226 aa20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 SP110Q9HB58 689 aa20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 SEPT3Q9UH03 358 aa20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 IPO11Q9UI26 975 aaKnown RBP20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 DOCK9Q9BZ29 2069 aa20.26■□□□□ 0.83
CEACAM3-201ENST00000344550 SPINT1O43278 529 aa20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 TM7SF2O76062 418 aa20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 RARAP10276 462 aa20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 CKMT2P17540 419 aa20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 XPAP23025 273 aaPredicted RBP20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 SERPINA4P29622 427 aa20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 PFN3P60673 137 aa20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 AP1S1P61966 158 aa20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 BNIP3Q12983 259 aa20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 AGERQ15109 404 aa20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 UGP2Q16851 508 aa20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 RALGPS1Q5JS13 557 aa20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 ERAP2Q6P179 960 aa20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 SRLQ86TD4 932 aa20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 CACTIN-AS1Q8N1I8 211 aa20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 EID2Q8N6I1 236 aa20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 FAM71BQ8TC56 605 aa20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 CXorf40AQ8TE69 158 aa20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 CENPTQ96BT3 561 aa20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 TBATAQ96M53 351 aa20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 CSPG4P5Q96PW8 444 aa20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 CINPQ9BW66 212 aaPredicted RBP20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 CALN1Q9BXU9 219 aa20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 TSPY26PQ9H489 355 aa20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 CA5BQ9Y2D0 317 aa20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 CSNK1G3Q9Y6M4 447 aa20.25■□□□□ 0.83
CEACAM3-201ENST00000344550 IGF2RP11717 2491 aa20.24■□□□□ 0.83
CEACAM3-201ENST00000344550 H3BM21 787 aa20.24■□□□□ 0.83
CEACAM3-201ENST00000344550 H2AFZP0C0S5 128 aa20.24■□□□□ 0.83
CEACAM3-201ENST00000344550 ALPPL2P10696 532 aa20.24■□□□□ 0.83
CEACAM3-201ENST00000344550 DGKAP23743 735 aa20.24■□□□□ 0.83
CEACAM3-201ENST00000344550 CLDN2P57739 230 aa20.24■□□□□ 0.83
CEACAM3-201ENST00000344550 SLC25A11Q02978 314 aaKnown RBP20.24■□□□□ 0.83
CEACAM3-201ENST00000344550 PTK2BQ14289 1009 aa20.24■□□□□ 0.83
CEACAM3-201ENST00000344550 CFAP58Q5T655 872 aa20.24■□□□□ 0.83
CEACAM3-201ENST00000344550 H2AFVQ71UI9 128 aa20.24■□□□□ 0.83
CEACAM3-201ENST00000344550 PTAR1Q7Z6K3 402 aaPredicted RBP20.24■□□□□ 0.83
CEACAM3-201ENST00000344550 PARGQ86W56 976 aa20.24■□□□□ 0.83
CEACAM3-201ENST00000344550 SLC22A18ASQ8N1D0 253 aa20.24■□□□□ 0.83
CEACAM3-201ENST00000344550 BBS5Q8N3I7 341 aa20.24■□□□□ 0.83
CEACAM3-201ENST00000344550 NPWQ8N729 165 aa20.24■□□□□ 0.83
CEACAM3-201ENST00000344550 OR4C6Q8NH72 309 aa20.24■□□□□ 0.83
CEACAM3-201ENST00000344550 CTNNBL1Q8WYA6 563 aaPredicted RBP20.24■□□□□ 0.83
CEACAM3-201ENST00000344550 DUSP23Q9BVJ7 150 aa20.24■□□□□ 0.83
CEACAM3-201ENST00000344550 USP29Q9HBJ7 922 aa20.24■□□□□ 0.83
CEACAM3-201ENST00000344550 FZD3Q9NPG1 666 aa20.24■□□□□ 0.83
CEACAM3-201ENST00000344550 EVA1BQ9NVM1 165 aa20.24■□□□□ 0.83
CEACAM3-201ENST00000344550 FRYQ5TBA9 3013 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms