RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 EMILIN2Q9BXX0 1053 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 MTMR12Q9C0I1 747 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 EHMT1Q9H9B1 1298 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 ZNF408Q9H9D4 720 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 AGPAT4Q9NRZ5 378 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.21□□□□□ -1.1
ATG4A-201ENST00000343524 GIMAP4Q9NUV9 329 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 FBXO28Q9NVF7 368 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 INTS10Q9NVR2 710 aaKnown RBP8.21□□□□□ -1.1
ATG4A-201ENST00000343524 SNTG2Q9NY99 539 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 IL20Q9NYY1 176 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 TXNDC16Q9P2K2 825 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 SLC9A2Q9UBY0 812 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 AGO2Q9UKV8 859 aaKnown RBP8.21□□□□□ -1.1
ATG4A-201ENST00000343524 PCDHA1Q9Y5I3 950 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 SNX5Q9Y5X3 404 aa8.21□□□□□ -1.1
ATG4A-201ENST00000343524 CNTNAP2Q9UHC6 1331 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 C3orf70A6NLC5 250 aaPredicted RBP8.2□□□□□ -1.1
ATG4A-201ENST00000343524 USP17L15C9J2P7 530 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 USP17L13C9JLJ4 530 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 USP17L11C9JVI0 530 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 USP17L18D6R9N7 530 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 USP17L22D6RA61 530 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 USP17L17D6RBQ6 530 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 USP17L19D6RCP7 530 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 USP17L20D6RJB6 530 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 AP3B1O00203 1094 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 PIK3R2O00459 728 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 GPC4O75487 556 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 UPK1BO75841 260 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 NTSR2O95665 410 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 DLGAP3O95886 979 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 CCNE2O96020 404 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 APOA1P02647 267 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 ALBP02768 609 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 MPOP05164 745 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 ADRB2P07550 413 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 MYL3P08590 195 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 CKMT2P17540 419 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 TCN1P20061 433 aaPredicted RBP8.2□□□□□ -1.1
ATG4A-201ENST00000343524 IL32P24001 234 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 DPP6P42658 865 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 NR4A2P43354 598 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 QARSP47897 775 aaKnown RBP8.2□□□□□ -1.1
ATG4A-201ENST00000343524 PRIM2P49643 509 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 EIF6P56537 245 aaKnown RBP8.2□□□□□ -1.1
ATG4A-201ENST00000343524 PPP2R2BQ00005 443 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 GTF2BQ00403 316 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 TAGLNQ01995 201 aaKnown RBP8.2□□□□□ -1.1
ATG4A-201ENST00000343524 RAD51Q06609 339 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 USP17L24Q0WX57 530 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 LAMC2Q13753 1193 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 PRKG1Q13976 671 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 CBX2Q14781 532 aaPredicted RBP8.2□□□□□ -1.1
ATG4A-201ENST00000343524 NPTX1Q15818 432 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 HIST2H2ACQ16777 129 aaPredicted RBP8.2□□□□□ -1.1
ATG4A-201ENST00000343524 DUSP7Q16829 419 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 TYSND1Q2T9J0 566 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 ZFP69Q49AA0 526 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 ATP13A4Q4VNC1 1196 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 BRDTQ58F21 947 aaPredicted RBP8.2□□□□□ -1.1
ATG4A-201ENST00000343524 CEP78Q5JTW2 689 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 CYP4A22Q5TCH4 519 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 LRRC8EQ6NSJ5 796 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 NEK5Q6P3R8 708 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 USP17L6PQ6QN14 398 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 USP51Q70EK9 711 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 FKBP9P1Q75LS8 142 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 PRSS48Q7RTY5 328 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 MAPKAPK5Q8IW41 473 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 LRRC47Q8N1G4 583 aaKnown RBP8.2□□□□□ -1.1
ATG4A-201ENST00000343524 OR6Q1Q8NGQ2 317 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 SPATA18Q8TC71 538 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 TAS1R2Q8TE23 839 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 TP53INP1Q96A56 240 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 SLCO4A1Q96BD0 722 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 DCPSQ96C86 337 aaKnown RBP8.2□□□□□ -1.1
ATG4A-201ENST00000343524 PGBD4Q96DM1 585 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 CEP295NLQ96MC4 621 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 ZNF560Q96MR9 790 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 MCEEQ96PE7 176 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 OR52B2Q96RD2 323 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 NAT9Q9BTE0 207 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 CHID1Q9BWS9 393 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 IL22Q9GZX6 179 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 MKRN2Q9H000 416 aaKnown RBP8.2□□□□□ -1.1
ATG4A-201ENST00000343524 ING2Q9H160 280 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 IRF2BPLQ9H1B7 796 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 HPS4Q9NQG7 708 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 RAB6BQ9NRW1 208 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 ADARB2Q9NS39 739 aaKnown RBP8.2□□□□□ -1.1
ATG4A-201ENST00000343524 SPEF1Q9Y4P9 236 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 PCDHGA7Q9Y5G6 932 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 MAU2Q9Y6X3 613 aa8.2□□□□□ -1.1
ATG4A-201ENST00000343524 IGKV6D-41A0A0C4DH26 115 aa8.19□□□□□ -1.1
ATG4A-201ENST00000343524 DHRS12A0PJE2 317 aa8.19□□□□□ -1.1
ATG4A-201ENST00000343524 HMX2A2RU54 273 aa8.19□□□□□ -1.1
ATG4A-201ENST00000343524 CENPXA8MT69 81 aa8.19□□□□□ -1.1
ATG4A-201ENST00000343524 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.19□□□□□ -1.1
ATG4A-201ENST00000343524 FAM86B1E9PN63 330 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms