RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 ADRM1Q16186 407 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 CYP51A1Q16850 503 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 CCDC153Q494R4 210 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 TAPT1Q6NXT6 567 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 GRIN3AQ8TCU5 1115 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 TMEM40Q8WWA1 233 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 ACOX2Q99424 681 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 AGAP2Q99490 1192 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 EXOSC4Q9NPD3 245 aaKnown RBP13.63□□□□□ -0.23
TMEM248-201ENST00000341567 ZMYM5Q9UJ78 669 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 CCDC88AQ3V6T2 1871 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 CACNA1SQ13698 1873 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 VPS26AO75436 327 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 FESP07332 822 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 FASP25445 335 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 RGS4P49798 205 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 RPS6KA3P51812 740 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 NUP107P57740 925 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 BOP1Q14137 746 aaKnown RBP13.63□□□□□ -0.23
TMEM248-201ENST00000341567 DCLRE1AQ6PJP8 1040 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 PACS1Q6VY07 963 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 STRADAQ7RTN6 431 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 ANKS1BQ7Z6G8 1248 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 C11orf96Q7Z7L8 435 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 OSTM1Q86WC4 334 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 ZDHHC14Q8IZN3 488 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 LRRC39Q96DD0 335 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 DGCR14Q96DF8 476 aaKnown RBP13.63□□□□□ -0.23
TMEM248-201ENST00000341567 LENG8Q96PV6 779 aaPredicted RBP13.63□□□□□ -0.23
TMEM248-201ENST00000341567 PEBP4Q96S96 227 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 CPNE1Q99829 537 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 MID1IP1Q9NPA3 183 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 AAASQ9NRG9 546 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 SNX15Q9NRS6 342 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 UBA2Q9UBT2 640 aaPredicted RBP13.63□□□□□ -0.23
TMEM248-201ENST00000341567 EGFL7Q9UHF1 273 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 BLOC1S6Q9UL45 172 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 GABRQQ9UN88 632 aa13.63□□□□□ -0.23
TMEM248-201ENST00000341567 NHSQ6T4R5 1651 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 MYH7BA7E2Y1 1941 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 C2P06681 752 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 MPSTP25325 297 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 TKTP29401 623 aaKnown RBP13.62□□□□□ -0.23
TMEM248-201ENST00000341567 TRIM32Q13049 653 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 KLF10Q13118 480 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 ZNF792Q3KQV3 632 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 SPANXN3Q5MJ09 141 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 GRTP1Q5TC63 336 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 B3GNT9Q6UX72 402 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 CLEC20AQ6ZU45 233 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 STK32CQ86UX6 486 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 MCRS1Q96EZ8 462 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 CAPNS2Q96L46 248 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 RNF145Q96MT1 663 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 CIB1Q99828 191 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 DGCR6LQ9BY27 220 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 POMKQ9H5K3 350 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 SEMA4BQ9NPR2 832 aaPredicted RBP13.62□□□□□ -0.23
TMEM248-201ENST00000341567 FBXO5Q9UKT4 447 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 F8W8V4 182 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 BTN3A1O00481 513 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 GSSP48637 474 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 CDK7P50613 346 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 UBE3AQ05086 875 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 SOX4Q06945 474 aaPredicted RBP13.62□□□□□ -0.23
TMEM248-201ENST00000341567 ELAVL2Q12926 359 aaKnown RBP13.62□□□□□ -0.23
TMEM248-201ENST00000341567 GRIK3Q13003 919 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 ZFP1Q6P2D0 407 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 TTC23LQ6PF05 361 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 MAGEE2Q8TD90 523 aaPredicted RBP13.62□□□□□ -0.23
TMEM248-201ENST00000341567 FAM162AQ96A26 154 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 IL22Q9GZX6 179 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 TBC1D13Q9NVG8 400 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.62□□□□□ -0.239e-7■■■□□ 17.4
TMEM248-201ENST00000341567 XPR1Q9UBH6 696 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 CDH22Q9UJ99 828 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 PCDHB9Q9Y5E1 797 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 RGSL1A5PLK6 1076 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 HDAC3O15379 428 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 SEPT4O43236 478 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 PIK3R1P27986 724 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 LRPAP1P30533 357 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 RPL9P32969 192 aaKnown RBP13.62□□□□□ -0.23
TMEM248-201ENST00000341567 NPY2RP49146 381 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 PGGT1BP53609 377 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 RALGDSQ12967 914 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 DMC1Q14565 340 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 PATL1Q86TB9 770 aaKnown RBP13.62□□□□□ -0.23
TMEM248-201ENST00000341567 RBM23Q86U06 439 aaKnown RBP13.62□□□□□ -0.23
TMEM248-201ENST00000341567 CORO1BQ9BR76 489 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 PCDHA11Q9Y5I1 949 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 CHD4Q14839 1912 aa13.62□□□□□ -0.23
TMEM248-201ENST00000341567 SF3B1O75533 1304 aaKnown RBP eCLIP13.61□□□□□ -0.234e-7■■■■■ 40.1
TMEM248-201ENST00000341567 MAP3K13O43283 966 aa13.61□□□□□ -0.23
TMEM248-201ENST00000341567 ADCY6O43306 1168 aa13.61□□□□□ -0.23
TMEM248-201ENST00000341567 EIF2B2P49770 351 aaKnown RBP13.61□□□□□ -0.23
TMEM248-201ENST00000341567 C21orf59P57076 290 aa13.61□□□□□ -0.23
TMEM248-201ENST00000341567 DAOAP59103 153 aa13.61□□□□□ -0.23
TMEM248-201ENST00000341567 LRRC74AQ0VAA2 488 aa13.61□□□□□ -0.23
TMEM248-201ENST00000341567 ITGADQ13349 1161 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms