RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 TEKT5Q96M29 485 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 PPP1R10Q96QC0 940 aaKnown RBP10.92□□□□□ -0.66
RTN3-201ENST00000338850 SERPINI1Q99574 410 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 SYT15Q9BQS2 421 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 FAM167BQ9BTA0 163 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 DRC3Q9H069 523 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 OSBPL2Q9H1P3 480 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 CSNK1G1Q9HCP0 422 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 OXSMQ9NWU1 459 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 C6orf203Q9P0P8 240 aaPredicted RBP10.92□□□□□ -0.66
RTN3-201ENST00000338850 KLHL8Q9P2G9 620 aaPredicted RBP10.92□□□□□ -0.66
RTN3-201ENST00000338850 CDH22Q9UJ99 828 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 IRAK3Q9Y616 596 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 PSAT1Q9Y617 370 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.92□□□□□ -0.66
RTN3-201ENST00000338850 TRIOO75962 3097 aa10.92□□□□□ -0.66
RTN3-201ENST00000338850 A0A096LPK6 155 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 CCDC189A1A4V9 331 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 TMEM221A6NGB7 291 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 M0R296 226 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 MATN2O00339 956 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 NPHS1O60500 1241 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 NEBLO76041 1014 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 MAP3K6O95382 1288 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 THRAP10827 490 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 ITGAXP20702 1163 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 LMO2P25791 158 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 PSMD8P48556 350 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 MXRA7P84157 204 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 UBAP2LQ14157 1087 aaKnown RBP10.91□□□□□ -0.66
RTN3-201ENST00000338850 GRM2Q14416 872 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 DCAF6Q58WW2 860 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 LIPMQ5VYY2 423 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 FSTL4Q6MZW2 842 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 ZCCHC23Q6ZST2 131 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 KIAA0408Q6ZU52 694 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 PID1Q7Z2X4 250 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 KCNMB4Q86W47 210 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 PDSS2Q86YH6 399 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 KBTBD2Q8IY47 623 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 PYROXD2Q8N2H3 581 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 FBXW8Q8N3Y1 598 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 SMG8Q8ND04 991 aaKnown RBP10.91□□□□□ -0.66
RTN3-201ENST00000338850 FBXO27Q8NI29 283 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 RP9Q8TA86 221 aaKnown RBP10.91□□□□□ -0.66
RTN3-201ENST00000338850 SLC22A17Q8WUG5 538 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 NCSTNQ92542 709 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 FAM149B1Q96BN6 582 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 VPS39Q96JC1 886 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 APOL6Q9BWW8 343 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 ILKAPQ9H0C8 392 aaPredicted RBP10.91□□□□□ -0.66
RTN3-201ENST00000338850 KCNH6Q9H252 994 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 PIGVQ9NUD9 493 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 DZANK1Q9NVP4 752 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 NDUFA13Q9P0J0 144 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 MARCOQ9UEW3 520 aaPredicted RBP10.91□□□□□ -0.66
RTN3-201ENST00000338850 STK39Q9UEW8 545 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 CDH9Q9ULB4 789 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 AAR2Q9Y312 384 aaKnown RBP10.91□□□□□ -0.66
RTN3-201ENST00000338850 WASF2Q9Y6W5 498 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 MYLKQ15746 1914 aa10.91□□□□□ -0.66
RTN3-201ENST00000338850 ZDBF2Q9HCK1 2354 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 MIA3Q5JRA6 1907 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 INPPL1O15357 1258 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 HDAC3O15379 428 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 FGF10O15520 208 aaPredicted RBP10.9□□□□□ -0.66
RTN3-201ENST00000338850 LYPLA1O75608 230 aaPredicted RBP10.9□□□□□ -0.66
RTN3-201ENST00000338850 ANXA9O76027 345 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 HSPA4LO95757 839 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 POMCP01189 267 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 IGLV3-25P01717 112 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 LTFP02788 710 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 FYNP06241 537 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 C2P06681 752 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 LYNP07948 512 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 COX4I1P13073 169 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 EPCAMP16422 314 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 KCNA4P22459 653 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 CCNCP24863 283 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 ARRB2P32121 409 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 RPL9P32969 192 aaKnown RBP10.9□□□□□ -0.66
RTN3-201ENST00000338850 CPA2P48052 419 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 SESN3P58005 492 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 DNAJB13P59910 316 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 ROR2Q01974 943 aaKnown RBP10.9□□□□□ -0.66
RTN3-201ENST00000338850 GALNT1Q10472 559 aaPredicted RBP10.9□□□□□ -0.66
RTN3-201ENST00000338850 KLF10Q13118 480 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 EIF4EBP2Q13542 120 aaPredicted RBP10.9□□□□□ -0.66
RTN3-201ENST00000338850 ITGA9Q13797 1035 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 BRMS1LQ5PSV4 323 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 RARS2Q5T160 578 aaKnown RBP10.9□□□□□ -0.66
RTN3-201ENST00000338850 SYCP2LQ5T4T6 812 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 CES5AQ6NT32 575 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 C16orf46Q6P387 395 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 IZUMO2Q6UXV1 221 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 STRA8Q7Z7C7 330 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 FAM35AQ86V20 835 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 KBTBD6Q86V97 674 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 GALNT15Q8N3T1 639 aa10.9□□□□□ -0.66
RTN3-201ENST00000338850 C12orf76Q8N812 135 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms