RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ZMPSTE24O75844 475 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 COX4I1P13073 169 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 LPOP22079 712 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-202ENST00000338368 CCND3P30281 292 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-202ENST00000338368 FOXN2P32314 431 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 MAPK8P45983 427 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 PRMT2P55345 433 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 TMEM259Q4ZIN3 620 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 PPM1LQ5SGD2 360 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 PRSS55Q6UWB4 352 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-202ENST00000338368 KIAA0408Q6ZU52 694 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 CCDC149Q6ZUS6 474 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 NPAS4Q8IUM7 802 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 ACTR8Q9H981 624 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 PNPLA8Q9NP80 782 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 TCAF1Q9Y4C2 921 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 ITGB6P18564 788 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 GTF2H3Q13889 308 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 ATP6AP1LQ52LC2 224 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 DTNBP1Q96EV8 351 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 OLFM3Q96PB7 478 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 PLK2Q9NYY3 685 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 PCDHB9Q9Y5E1 797 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 ARVCFO00192 962 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 ZBTB17Q13105 803 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 ZNF212Q9UDV6 495 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 TMEM114B3SHH9 223 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 PSMG1O95456 288 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 GABRR2P28476 465 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 PPIDQ08752 370 aaKnown RBP6.34□□□□□ -1.39
PRKDC-202ENST00000338368 MILR1Q7Z6M3 343 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 DENND6AQ8IWF6 608 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 OR56A4Q8NGH8 313 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 HMCESQ96FZ2 354 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 SCLYQ96I15 445 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 TAS2R1Q9NYW7 299 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 C17orf99Q6UX52 265 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 VPS37AQ8NEZ2 397 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 HGH1Q9BTY7 390 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 GATA5Q9BWX5 397 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-202ENST00000338368 RPL26L1Q9UNX3 145 aaKnown RBP6.34□□□□□ -1.39
PRKDC-202ENST00000338368 GNEQ9Y223 722 aaKnown RBP6.34□□□□□ -1.39
PRKDC-202ENST00000338368 PCDHGC4Q9Y5F7 938 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 CCL22O00626 93 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 LZTS3O60299 673 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-202ENST00000338368 KATNA1O75449 491 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 MZF1P28698 734 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-202ENST00000338368 UBAP2LQ14157 1087 aaKnown RBP6.34□□□□□ -1.39
PRKDC-202ENST00000338368 MPP2Q14168 576 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 LPIN1Q14693 890 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 PAFAH1B3Q15102 231 aaKnown RBP6.34□□□□□ -1.39
PRKDC-202ENST00000338368 CCDC142Q17RM4 750 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 UBXN11Q5T124 520 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 LDB1Q86U70 411 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-202ENST00000338368 FIBCD1Q8N539 461 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 ARFGAP1Q8N6T3 406 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 CCDC90BQ9GZT6 254 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 TBX18O95935 607 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 NDST2P52849 883 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 C6orf89Q6UWU4 347 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 SERINC5Q86VE9 423 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 OR7D4Q8NG98 312 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 HAPLN3Q96S86 360 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 CORO1BQ9BR76 489 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 SPG21Q9NZD8 308 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 POLG2Q9UHN1 485 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 ZFP37Q9Y6Q3 630 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-202ENST00000338368 E7ESA3 106 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 CCNT2O60583 730 aaKnown RBP6.34□□□□□ -1.39
PRKDC-202ENST00000338368 SATB1Q01826 763 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 IL10RBQ08334 325 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 SLC20A2Q08357 652 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 FASTKQ14296 549 aaKnown RBP6.34□□□□□ -1.39
PRKDC-202ENST00000338368 KCNJ11Q14654 390 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 PFKFB4Q16877 469 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 UBR7Q8N806 425 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 OR52K2Q8NGK3 314 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 RP9Q8TA86 221 aaKnown RBP6.34□□□□□ -1.39
PRKDC-202ENST00000338368 CASP10Q92851 521 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 WDR41Q9HAD4 459 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 CRTAC1Q9NQ79 661 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 APPL1Q9UKG1 709 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 TBL1XO60907 577 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 OR56A5P0C7T3 313 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 HSPA1AP0DMV8 641 aaKnown RBP6.34□□□□□ -1.39
PRKDC-202ENST00000338368 HSPA1BP0DMV9 641 aaKnown RBP6.34□□□□□ -1.39
PRKDC-202ENST00000338368 PKMP14618 531 aaKnown RBP6.34□□□□□ -1.39
PRKDC-202ENST00000338368 HNRNPLP14866 589 aaKnown RBP eCLIP6.34□□□□□ -1.39
PRKDC-202ENST00000338368 HALP42357 657 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 CXCR3P49682 368 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 DSC2Q02487 901 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 UBAP2Q5T6F2 1119 aaKnown RBP6.34□□□□□ -1.39
PRKDC-202ENST00000338368 FSTL4Q6MZW2 842 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 CLEC4FQ8N1N0 589 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 STK40Q8N2I9 435 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 C8orf48Q96LL4 319 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 AGAP2Q99490 1192 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 PAAF1Q9BRP4 392 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 FAF1Q9UNN5 650 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-202ENST00000338368 MEIS3P2A8K0S8 358 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms