RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 RAB15P59190 212 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 ZNF460Q14592 562 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 PFKFB4Q16877 469 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 CERCAMQ5T4B2 595 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 ADGRG6Q86SQ4 1221 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 HIPK1Q86Z02 1210 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 SCN4BQ8IWT1 228 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 ANKLE1Q8NAG6 615 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 FAM120BQ96EK7 910 aaKnown RBP13.35□□□□□ -0.27
COL2A1-201ENST00000337299 MFSD3Q96ES6 412 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 APOL5Q9BWW9 433 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 GLIS2Q9BZE0 524 aaPredicted RBP13.35□□□□□ -0.27
COL2A1-201ENST00000337299 TPK1Q9H3S4 243 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 ZNF556Q9HAH1 456 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 EXD2Q9NVH0 621 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 MYH3P11055 1940 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 NEMP2A6NFY4 417 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 ASB14A6NK59 587 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 FAM25AB3EWG3 89 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 FAM25CB3EWG5 89 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 FAM25GB3EWG6 89 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 CST3P01034 146 aaPredicted RBP13.35□□□□□ -0.27
COL2A1-201ENST00000337299 IFNA8P32881 189 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 NAMPTP43490 491 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 IRF9Q00978 393 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 DDR2Q16832 855 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 SH3PXD2AQ5TCZ1 1133 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 REP15Q6BDI9 236 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 ELMSAN1Q6PJG2 1045 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 NECAB2Q7Z6G3 386 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 WDR49Q8IV35 697 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 SLC16A10Q8TF71 515 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 ZNF512Q96ME7 567 aaPredicted RBP13.35□□□□□ -0.27
COL2A1-201ENST00000337299 IRF2BPLQ9H1B7 796 aa13.35□□□□□ -0.27
COL2A1-201ENST00000337299 KLF11O14901 512 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 EIF2S1P05198 315 aaKnown RBP13.34□□□□□ -0.27
COL2A1-201ENST00000337299 GOT1P17174 413 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 CHRM3P20309 590 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 IL1R2P27930 398 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 CSTF3Q12996 717 aaKnown RBP13.34□□□□□ -0.27
COL2A1-201ENST00000337299 CCNYL2Q5T2Q4 361 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 PIWIL4Q7Z3Z4 852 aaKnown RBP13.34□□□□□ -0.27
COL2A1-201ENST00000337299 THAP5Q7Z6K1 395 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 EFHBQ8N7U6 833 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 AGAP2Q99490 1192 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 ABT1Q9ULW3 272 aaKnown RBP13.34□□□□□ -0.27
COL2A1-201ENST00000337299 ZNF510Q9Y2H8 683 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 EVPLLA8MZ36 301 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 RGL2O15211 777 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 ERCC2P18074 760 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 GRK3P35626 688 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 ZNF143P52747 638 aaPredicted RBP13.34□□□□□ -0.27
COL2A1-201ENST00000337299 CDKL1Q00532 357 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 MXD4Q14582 209 aaPredicted RBP13.34□□□□□ -0.27
COL2A1-201ENST00000337299 COLEC12Q5KU26 742 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 FAM183BPQ6ZVS7 135 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 SLC15A4Q8N697 577 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 CNTD1Q8N815 330 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 OR9I1Q8NGQ6 314 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 HDAC10Q969S8 669 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 NXNL1Q96CM4 212 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 SPATA33Q96N06 139 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 KCNK13Q9HB14 408 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 TMX2Q9Y320 296 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 VILLO15195 856 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 BUD23O43709 281 aaKnown RBP13.34□□□□□ -0.27
COL2A1-201ENST00000337299 CLPXO76031 633 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 LINC00032P0C843 101 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 ATP5F1P24539 256 aaPredicted RBP13.34□□□□□ -0.27
COL2A1-201ENST00000337299 MSLNQ13421 630 aaPredicted RBP13.34□□□□□ -0.27
COL2A1-201ENST00000337299 CEACAM7Q14002 265 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 RAB39AQ14964 217 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 C19orf18Q8NEA5 215 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 CENPNQ96H22 339 aaPredicted RBP13.34□□□□□ -0.27
COL2A1-201ENST00000337299 PPM1MQ96MI6 270 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 ALG2Q9H553 416 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 SIRPGQ9P1W8 387 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 WRAP73Q9P2S5 460 aaPredicted RBP13.34□□□□□ -0.27
COL2A1-201ENST00000337299 MTRRQ9UBK8 725 aa13.34□□□□□ -0.27
COL2A1-201ENST00000337299 CYP2C8P10632 490 aa13.33□□□□□ -0.27
COL2A1-201ENST00000337299 CAPGP40121 348 aa13.33□□□□□ -0.27
COL2A1-201ENST00000337299 GRIA2P42262 883 aa13.33□□□□□ -0.27
COL2A1-201ENST00000337299 AKR1D1P51857 326 aa13.33□□□□□ -0.27
COL2A1-201ENST00000337299 NRG1Q02297 640 aaPredicted RBP13.33□□□□□ -0.27
COL2A1-201ENST00000337299 CDH17Q12864 832 aa13.33□□□□□ -0.27
COL2A1-201ENST00000337299 TRIP4Q15650 581 aaPredicted RBP13.33□□□□□ -0.27
COL2A1-201ENST00000337299 CA9Q16790 459 aa13.33□□□□□ -0.27
COL2A1-201ENST00000337299 DRICH1Q6PGQ1 229 aaPredicted RBP13.33□□□□□ -0.27
COL2A1-201ENST00000337299 TCAIMQ8N3R3 496 aa13.33□□□□□ -0.27
COL2A1-201ENST00000337299 MKL1Q969V6 931 aa13.33□□□□□ -0.27
COL2A1-201ENST00000337299 VPS33AQ96AX1 596 aa13.33□□□□□ -0.27
COL2A1-201ENST00000337299 NODALQ96S42 347 aa13.33□□□□□ -0.27
COL2A1-201ENST00000337299 PDGFDQ9GZP0 370 aaPredicted RBP13.33□□□□□ -0.27
COL2A1-201ENST00000337299 KANSL3Q9P2N6 904 aa13.33□□□□□ -0.27
COL2A1-201ENST00000337299 FETUBQ9UGM5 382 aa13.33□□□□□ -0.27
COL2A1-201ENST00000337299 C3orf18Q9UK00 162 aa13.33□□□□□ -0.27
COL2A1-201ENST00000337299 PSME2Q9UL46 239 aa13.33□□□□□ -0.27
COL2A1-201ENST00000337299 SLC30A1Q9Y6M5 507 aa13.33□□□□□ -0.27
COL2A1-201ENST00000337299 LBPP18428 481 aa13.33□□□□□ -0.28
COL2A1-201ENST00000337299 CLCN3P51790 818 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms