RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 MMP2P08253 660 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 ZSCAN5DPP0CG00 497 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 ACTN2P35609 894 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 FNTAP49354 379 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 SKOR1P84550 965 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 CKAP4Q07065 602 aaKnown RBP14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 TRAF2Q12933 501 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 TUBB2AQ13885 445 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 IHHQ14623 411 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 P3H1Q32P28 736 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 TTC31Q49AM3 519 aaPredicted RBP14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 CFAP58Q5T655 872 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 PRPF39Q86UA1 669 aaKnown RBP14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 KLHL7Q8IXQ5 586 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 HDDC3Q8N4P3 179 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 PAF1Q8N7H5 531 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 GLIS1Q8NBF1 620 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 PDCD6IPQ8WUM4 868 aaKnown RBP14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 FCRL5Q96RD9 977 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 TUBB2BQ9BVA1 445 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 CD93Q9NPY3 652 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 ITM2CQ9NQX7 267 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 FBXL12Q9NXK8 326 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 NCKAP1Q9Y2A7 1128 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 RAI2Q9Y5P3 530 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 ANKRD36A6QL64 1941 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 C16orf96A6NNT2 1141 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 SOCS5O75159 536 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 RNASEH2AO75792 299 aaKnown RBP14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 METTL18O95568 372 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 MT-CYBP00156 380 aaPredicted RBP14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 SP9P0CG40 484 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 ITGB7P26010 798 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 PSMB4P28070 264 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 DRD3P35462 400 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 TPMTP51580 245 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 CNTN1Q12860 1018 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 SFSWAPQ12872 951 aaKnown RBP14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 PRPSAP1Q14558 356 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 KCTD19Q17RG1 926 aaPredicted RBP14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 WHAMMP3Q1A5X7 153 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 PARP6Q2NL67 630 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 DNTTIP2Q5QJE6 756 aaKnown RBP14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 PARS2Q7L3T8 475 aaKnown RBP14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 FAM124AQ86V42 546 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 WDR5BQ86VZ2 330 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 LONP2Q86WA8 852 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 TAB3Q8N5C8 712 aaPredicted RBP14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 SPATA4Q8NEY3 305 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 GRK7Q8WTQ7 553 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 TADA1Q96BN2 335 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 UBP1Q9NZI7 540 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 USP36Q9P275 1121 aaKnown RBP14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 SERGEFQ9UGK8 458 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 FEZ2Q9UHY8 353 aaPredicted RBP14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 CYP8B1Q9UNU6 501 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 MRFAP1Q9Y605 127 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 CCDC163A0A0D9SF12 145 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 TRAFD1O14545 582 aaPredicted RBP14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 HTRA2O43464 458 aaPredicted RBP14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 ZNF217O75362 1048 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 PMPCBO75439 489 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 KRT14P02533 472 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 CA4P22748 312 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 RPL22P35268 128 aaKnown RBP14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 P2RY2P41231 377 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 NEK3P51956 506 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 C2orf54Q08AI8 447 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 TRIP13Q15645 432 aaPredicted RBP14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 PCSK7Q16549 785 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 ZNF528Q3MIS6 628 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 ARMC12Q5T9G4 340 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 FAXCQ5TGI0 409 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 FBXL19Q6PCT2 694 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 USP30Q70CQ3 517 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 ERN2Q76MJ5 926 aaKnown RBP14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 KDELC2Q7Z4H8 507 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 KBTBD6Q86V97 674 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 ZSWIM9Q86XI8 627 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 HCAR2Q8TDS4 363 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 RLN3Q8WXF3 142 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 ECHDC3Q96DC8 303 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 OXNAD1Q96HP4 312 aaPredicted RBP14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 GORASP1Q9BQQ3 440 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 HDAC8Q9BY41 377 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 NEUROG2Q9H2A3 272 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 PAK5Q9P286 719 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 DKK3Q9UBP4 350 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 FAM153AQ9UHL3 310 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 CHKBQ9Y259 395 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 INVSQ9Y283 1065 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 PCDHB9Q9Y5E1 797 aa14.21□□□□□ -0.14
APOBEC3B-202ENST00000335760 A0A1W2PQ67 120 aa14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 TSPAN11A1L157 253 aa14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 ANXA9O76027 345 aa14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 PGLSO95336 258 aa14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 ECEL1O95672 775 aa14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 CPP00450 1065 aa14.2□□□□□ -0.14
APOBEC3B-202ENST00000335760 ADRB3P13945 408 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms