RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ENPEPQ07075 957 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 TKFCQ3LXA3 575 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 TEX47Q8TBZ9 253 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 RASSF1Q9NS23 344 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 PCYOX1Q9UHG3 505 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 GRIP1Q9Y3R0 1128 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 DAGLAQ9Y4D2 1042 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 CLDN25C9JDP6 229 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 BMP10O95393 424 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 SERPINF2P08697 491 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 LINC00032P0C843 101 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 TCF7P36402 384 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-201ENST00000334504 PRKAG1P54619 331 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 OLR1P78380 273 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 SCN1BQ07699 218 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 BIKQ13323 160 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 GK5Q6ZS86 529 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 BRINP3Q76B58 766 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 THAP5Q7Z6K1 395 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 SPPL2CQ8IUH8 684 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 GALNT15Q8N3T1 639 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 SELENOMQ8WWX9 145 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 C18orf25Q96B23 403 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-201ENST00000334504 CCDC3Q9BQI4 270 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 IRF2BPLQ9H1B7 796 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 CHMP1AQ9HD42 196 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-201ENST00000334504 EIF3KQ9UBQ5 218 aaKnown RBP9.88□□□□□ -0.83
COL4A6-201ENST00000334504 GIT1Q9Y2X7 761 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 A0A1W2PPM1 405 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 MTHFRP42898 656 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 NAMPTP43490 491 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 HUNKP57058 714 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 MCOLN3Q8TDD5 553 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 KCTD4Q8WVF5 259 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 ZFP14Q9HCL3 533 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 CUEDC1Q9NWM3 386 aaPredicted RBP9.87□□□□□ -0.83
COL4A6-201ENST00000334504 CDH22Q9UJ99 828 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 ADAM28Q9UKQ2 775 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 MRPL42Q9Y6G3 142 aaKnown RBP9.87□□□□□ -0.83
COL4A6-201ENST00000334504 U3KQV3 271 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 NRKQ7Z2Y5 1582 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 H0Y858 1186 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 KCNK1O00180 336 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 PIAS1O75925 651 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 STAG3L1P0CL83 205 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 NR2F6P10588 404 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 HGFP14210 728 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 POLR2EP19388 210 aaKnown RBP9.87□□□□□ -0.83
COL4A6-201ENST00000334504 ATP5F1P24539 256 aaPredicted RBP9.87□□□□□ -0.83
COL4A6-201ENST00000334504 KCTD19Q17RG1 926 aaPredicted RBP9.87□□□□□ -0.83
COL4A6-201ENST00000334504 TCEAL5Q5H9L2 206 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 OGFOD2Q6N063 350 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 TFAP2DQ7Z6R9 452 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 CDYL2Q8N8U2 506 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 HACL1Q9UJ83 578 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 FAM50BQ9Y247 325 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 PCDHGC5Q9Y5F6 944 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 APOC1P02654 83 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 PGRP06401 933 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 GABRB2P47870 512 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 RPL38P63173 70 aaKnown RBP9.87□□□□□ -0.83
COL4A6-201ENST00000334504 RAPSNQ13702 412 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 ZNF615Q8N8J6 731 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 RASSF5Q8WWW0 418 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 ING5Q8WYH8 240 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 TMEM159Q96B96 161 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 PNPLA8Q9NP80 782 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 CATSPERZQ9NTU4 200 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 METP08581 1390 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 COL15A1P39059 1388 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 APOC4-APOC2K7ER74 178 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 FFAR3O14843 346 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 GPR42O15529 346 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 APOC2P02655 101 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 PIK3CGP48736 1102 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 OR2B6P58173 313 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 ILF2Q12905 390 aaKnown RBP9.87□□□□□ -0.83
COL4A6-201ENST00000334504 CRY1Q16526 586 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 EIF2S3LQ2VIR3 472 aaKnown RBP9.87□□□□□ -0.83
COL4A6-201ENST00000334504 GLB1LQ6UWU2 654 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 DEF8Q6ZN54 512 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 DAW1Q8N136 415 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 OR52K1Q8NGK4 314 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 EDEM1Q92611 657 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 EHD1Q9H4M9 534 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 ABCG2Q9UNQ0 655 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 ASTN2O75129 1339 aaPredicted RBP9.87□□□□□ -0.83
COL4A6-201ENST00000334504 PRDM15P57071 1507 aaPredicted RBP9.87□□□□□ -0.83
COL4A6-201ENST00000334504 BCKDKO14874 412 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 OR56A5P0C7T3 313 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 MMP13P45452 471 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 IL2P60568 153 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 ZNF268Q14587 947 aaPredicted RBP9.87□□□□□ -0.83
COL4A6-201ENST00000334504 GPAT3Q53EU6 434 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 SV2AQ7L0J3 742 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 ALLCQ8N6M5 410 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 SCAIQ8N9R8 606 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 DUSP9Q99956 384 aaKnown RBP9.87□□□□□ -0.83
COL4A6-201ENST00000334504 NLNQ9BYT8 704 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 CHIAQ9BZP6 476 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms