RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 SLC7A2P52569 658 aa23.83■■□□□ 1.4
TSKU-201ENST00000333090 RABGGTBP53611 331 aa23.83■■□□□ 1.4
TSKU-201ENST00000333090 NUP107P57740 925 aa23.83■■□□□ 1.4
TSKU-201ENST00000333090 TAS2R39P59534 338 aa23.83■■□□□ 1.4
TSKU-201ENST00000333090 ESRRGP62508 458 aa23.83■■□□□ 1.4
TSKU-201ENST00000333090 TTLL4Q14679 1199 aa23.83■■□□□ 1.4
TSKU-201ENST00000333090 BNIPLQ7Z465 357 aa23.83■■□□□ 1.4
TSKU-201ENST00000333090 DHFR2Q86XF0 187 aa23.83■■□□□ 1.4
TSKU-201ENST00000333090 RNF135Q8IUD6 432 aa23.83■■□□□ 1.4
TSKU-201ENST00000333090 BBS5Q8N3I7 341 aa23.83■■□□□ 1.4
TSKU-201ENST00000333090 OSBPL6Q9BZF3 934 aa23.83■■□□□ 1.4
TSKU-201ENST00000333090 CD300AQ9UGN4 299 aa23.83■■□□□ 1.4
TSKU-201ENST00000333090 CROTQ9UKG9 612 aa23.83■■□□□ 1.4
TSKU-201ENST00000333090 DERAQ9Y315 318 aa23.83■■□□□ 1.4
TSKU-201ENST00000333090 MTSS1O43312 755 aa23.82■■□□□ 1.4
TSKU-201ENST00000333090 BMP10O95393 424 aa23.82■■□□□ 1.4
TSKU-201ENST00000333090 PRKCQQ04759 706 aa23.82■■□□□ 1.4
TSKU-201ENST00000333090 TMEM62Q0P6H9 643 aa23.82■■□□□ 1.4
TSKU-201ENST00000333090 SAMD4BQ5PRF9 694 aaKnown RBP23.82■■□□□ 1.4
TSKU-201ENST00000333090 SULF1Q8IWU6 871 aa23.82■■□□□ 1.4
TSKU-201ENST00000333090 SPATA22Q8NHS9 363 aa23.82■■□□□ 1.4
TSKU-201ENST00000333090 ISOC1Q96CN7 298 aa23.82■■□□□ 1.4
TSKU-201ENST00000333090 HDAC11Q96DB2 347 aa23.82■■□□□ 1.4
TSKU-201ENST00000333090 CELF6Q96J87 481 aaKnown RBP23.82■■□□□ 1.4
TSKU-201ENST00000333090 TEKT5Q96M29 485 aa23.82■■□□□ 1.4
TSKU-201ENST00000333090 UHRF1Q96T88 793 aaPredicted RBP23.82■■□□□ 1.4
TSKU-201ENST00000333090 MRPL57Q9BQC6 102 aaKnown RBP23.82■■□□□ 1.4
TSKU-201ENST00000333090 UPF3AQ9H1J1 476 aaKnown RBP23.82■■□□□ 1.4
TSKU-201ENST00000333090 SARDHQ9UL12 918 aa23.82■■□□□ 1.4
TSKU-201ENST00000333090 SNX10Q9Y5X0 201 aa23.82■■□□□ 1.4
TSKU-201ENST00000333090 A0A0G2JMZ2 1700 aa23.82■■□□□ 1.4
TSKU-201ENST00000333090 LRRC37A2A6NM11 1700 aa23.82■■□□□ 1.4
TSKU-201ENST00000333090 CNMDO75829 334 aa23.82■■□□□ 1.4
TSKU-201ENST00000333090 SRP72O76094 671 aaKnown RBP23.82■■□□□ 1.4
TSKU-201ENST00000333090 STAMBPO95630 424 aa23.82■■□□□ 1.4
TSKU-201ENST00000333090 ATP5F1P24539 256 aaPredicted RBP23.82■■□□□ 1.4
TSKU-201ENST00000333090 TPP2P29144 1249 aaPredicted RBP23.82■■□□□ 1.4
TSKU-201ENST00000333090 PLK1P53350 603 aa23.82■■□□□ 1.4
TSKU-201ENST00000333090 PRPSAP1Q14558 356 aa23.82■■□□□ 1.4
TSKU-201ENST00000333090 DCAF4L1Q3SXM0 396 aa23.82■■□□□ 1.4
TSKU-201ENST00000333090 APPL2Q8NEU8 664 aa23.82■■□□□ 1.4
TSKU-201ENST00000333090 TFAP2CQ92754 450 aa23.82■■□□□ 1.4
TSKU-201ENST00000333090 PLGRKTQ9HBL7 147 aa23.82■■□□□ 1.4
TSKU-201ENST00000333090 ATP6V1G1O75348 118 aa23.81■■□□□ 1.4
TSKU-201ENST00000333090 AKAP5P24588 427 aa23.81■■□□□ 1.4
TSKU-201ENST00000333090 LRPAP1P30533 357 aa23.81■■□□□ 1.4
TSKU-201ENST00000333090 CSHL1Q14406 222 aa23.81■■□□□ 1.4
TSKU-201ENST00000333090 MAP7D1Q3KQU3 841 aa23.81■■□□□ 1.4
TSKU-201ENST00000333090 ESRP1Q6NXG1 681 aaKnown RBP23.81■■□□□ 1.4
TSKU-201ENST00000333090 CROCCP3Q8IVE0 287 aa23.81■■□□□ 1.4
TSKU-201ENST00000333090 DUSP16Q9BY84 665 aa23.81■■□□□ 1.4
TSKU-201ENST00000333090 CDHR5Q9HBB8 845 aa23.81■■□□□ 1.4
TSKU-201ENST00000333090 FAM155AB1AL88 458 aaPredicted RBP23.81■■□□□ 1.4
TSKU-201ENST00000333090 SEC24DO94855 1032 aaPredicted RBP23.81■■□□□ 1.4
TSKU-201ENST00000333090 KCNA5P22460 613 aa23.81■■□□□ 1.4
TSKU-201ENST00000333090 GJA9P57773 515 aa23.81■■□□□ 1.4
TSKU-201ENST00000333090 PPP4R4Q6NUP7 873 aa23.81■■□□□ 1.4
TSKU-201ENST00000333090 TTC33Q6PID6 262 aaPredicted RBP23.81■■□□□ 1.4
TSKU-201ENST00000333090 B3GALNT2Q8NCR0 500 aa23.81■■□□□ 1.4
TSKU-201ENST00000333090 ARHGEF38Q9NXL2 777 aa23.81■■□□□ 1.4
TSKU-201ENST00000333090 SFMBT1Q9UHJ3 866 aa23.81■■□□□ 1.4
TSKU-201ENST00000333090 AURKCQ9UQB9 309 aa23.81■■□□□ 1.4
TSKU-201ENST00000333090 NRP2O60462 931 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 LAMC2Q13753 1193 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 KCTD2Q14681 263 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 NOL9Q5SY16 702 aaKnown RBP23.8■■□□□ 1.4
TSKU-201ENST00000333090 PKN3Q6P5Z2 889 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 DHRS4L2Q6PKH6 230 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 CBR4Q8N4T8 237 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 TRPC4APQ8TEL6 797 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 C12orf43Q96C57 262 aaKnown RBP23.8■■□□□ 1.4
TSKU-201ENST00000333090 PPP1R14BQ96C90 147 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 SLC25A23Q9BV35 468 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 NXF3Q9H4D5 531 aaKnown RBP23.8■■□□□ 1.4
TSKU-201ENST00000333090 GOLGA2P5Q9HBQ8 144 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 TMEM181Q9P2C4 612 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 CDC14AQ9UNH5 594 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 A0A087WXM4 84 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 ATP6AP2A0A1C7CYW4 349 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 SH3PXD2BA1X283 911 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 NRP1O14786 923 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 FOXD2O60548 495 aaPredicted RBP23.8■■□□□ 1.4
TSKU-201ENST00000333090 ATP6AP2O75787 350 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 MT-CYBP00156 380 aaPredicted RBP23.8■■□□□ 1.4
TSKU-201ENST00000333090 HOXA11P31270 313 aaPredicted RBP23.8■■□□□ 1.4
TSKU-201ENST00000333090 SLC1A2P43004 574 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 SLC12A2P55011 1212 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 CTBSQ01459 385 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 SEMA3BQ13214 749 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 CUZD1Q86UP6 607 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 AFAP1L2Q8N4X5 818 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 TNIP3Q96KP6 325 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 MEAF6Q9HAF1 191 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 WDR6Q9NNW5 1121 aaKnown RBP23.8■■□□□ 1.4
TSKU-201ENST00000333090 VPS45Q9NRW7 570 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 SMOXQ9NWM0 555 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 KLK14Q9P0G3 267 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 SLC2A6Q9UGQ3 507 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 CSADQ9Y600 493 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 RAD54BQ9Y620 910 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms