RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 RARS2Q5T160 578 aaKnown RBP14.18□□□□□ -0.14
ATP2C1-201ENST00000328560 GALNT15Q8N3T1 639 aa14.18□□□□□ -0.14
ATP2C1-201ENST00000328560 SH3GL3Q99963 347 aa14.18□□□□□ -0.14
ATP2C1-201ENST00000328560 ABI2Q9NYB9 513 aaPredicted RBP14.18□□□□□ -0.14
ATP2C1-201ENST00000328560 PRPF19Q9UMS4 504 aaKnown RBP14.18□□□□□ -0.14
ATP2C1-201ENST00000328560 DICER1Q9UPY3 1922 aaKnown RBP14.18□□□□□ -0.14
ATP2C1-201ENST00000328560 MANSC4A6NHS7 340 aaPredicted RBP14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 MATN3O15232 486 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 ZNF189O75820 626 aaPredicted RBP14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 ARCN1P48444 511 aaKnown RBP14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 SLC5A3P53794 718 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 NME5P56597 212 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 PDAP1Q13442 181 aaKnown RBP14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 HNRNPDQ14103 355 aaKnown RBP14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 PPP1R3AQ16821 1122 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 UPP1Q16831 310 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 GEN1Q17RS7 908 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 CNPY1Q3B7I2 92 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 AGKQ53H12 422 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 SATL1Q86VE3 508 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 SPATA2LQ8IUW3 424 aaPredicted RBP14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 SOCS4Q8WXH5 440 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 PCDHAC1Q9H158 963 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 SEMA6AQ9H2E6 1030 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 ZFYVE28Q9HCC9 887 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 ZBTB26Q9HCK0 441 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 C15orf38-AP3S2A0A0A6YYH1 394 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 OR51F1A6NGY5 319 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 OR6B1O95007 311 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 RALGDSQ12967 914 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 TLR1Q15399 786 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 ZNF423Q2M1K9 1284 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 ARPINQ7Z6K5 226 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 THEM5Q8N1Q8 247 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 CEP70Q8NHQ1 597 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 GPR78Q96P69 363 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 OLFM1Q99784 485 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 MCMBPQ9BTE3 642 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 MRPL1Q9BYD6 325 aaKnown RBP14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 ENTPD7Q9NQZ7 604 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 PCDHGB4Q9UN71 923 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 CRYL1Q9Y2S2 319 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 MTF2Q9Y483 593 aaPredicted RBP14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 PCDHGB5Q9Y5G0 923 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 SLCO1B7G3V0H7 640 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 KPNA6O60684 536 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 CSPG5O95196 566 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 HMBSP08397 361 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 CD86P42081 329 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 CHN2P52757 468 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 TSPY1Q01534 308 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 ROR2Q01974 943 aaKnown RBP14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 FAM83EQ2M2I3 478 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 MFSD14CQ5VZR4 134 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 CWF19L1Q69YN2 538 aaKnown RBP14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 CLEC6AQ6EIG7 209 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 POTEHQ6S545 545 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 GPR152Q8TDT2 470 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 MRGPRX2Q96LB1 330 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 MRPL57Q9BQC6 102 aaKnown RBP14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 FAM192AQ9GZU8 254 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 OSBPL2Q9H1P3 480 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 CLIC5Q9NZA1 410 aa14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.17□□□□□ -0.14
ATP2C1-201ENST00000328560 SDHDO14521 159 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 ATP5F1P24539 256 aaPredicted RBP14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 GRIA2P42262 883 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 FRG1Q14331 258 aaKnown RBP14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 GK3PQ14409 553 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 PIGGQ5H8A4 983 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 GDF6Q6KF10 455 aaPredicted RBP14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 CYP2R1Q6VVX0 501 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 SETD3Q86TU7 594 aaPredicted RBP14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 PGAM4Q8N0Y7 254 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 NMD3Q96D46 503 aaKnown RBP14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 PKP2Q99959 881 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 NMUR1Q9HB89 426 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 TNFRSF12AQ9NP84 129 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 A0A1W2PQH9 124 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 TARM1B6A8C7 271 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 E9PAM4 449 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 SUPT7LO94864 414 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 CHRNA1P02708 482 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 FGFR3P22607 806 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 CALRP27797 417 aaKnown RBP14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 CDH13P55290 713 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 NRF1Q16656 503 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 C6orf52Q5T4I8 152 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 PDCD6IPQ8WUM4 868 aaKnown RBP14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 CNDP1Q96KN2 507 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 SPATA16Q9BXB7 569 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 ALG9Q9H6U8 611 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 ZDHHC7Q9NXF8 308 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 Q9Y3F1 56 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 J3KR12 359 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 DUSP11O75319 330 aaKnown RBP14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 COL6A2P12110 1019 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 PRAMEP78395 509 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 PIWIL4Q7Z3Z4 852 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms