RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 SPPL2BQ8TCT7 592 aa21.61■■□□□ 1.05
LIMS2-201ENST00000324938 DTX3LQ8TDB6 740 aa21.61■■□□□ 1.05
LIMS2-201ENST00000324938 DNAJC9Q8WXX5 260 aa21.61■■□□□ 1.05
LIMS2-201ENST00000324938 MOCOSQ96EN8 888 aa21.61■■□□□ 1.05
LIMS2-201ENST00000324938 ZNF333Q96JL9 665 aa21.61■■□□□ 1.05
LIMS2-201ENST00000324938 SPATA17Q96L03 361 aa21.61■■□□□ 1.05
LIMS2-201ENST00000324938 B3GALT6Q96L58 329 aa21.61■■□□□ 1.05
LIMS2-201ENST00000324938 CCR10P46092 362 aa21.61■■□□□ 1.05
LIMS2-201ENST00000324938 SLC12A2P55011 1212 aa21.61■■□□□ 1.05
LIMS2-201ENST00000324938 IL10RBQ08334 325 aa21.61■■□□□ 1.05
LIMS2-201ENST00000324938 IHHQ14623 411 aa21.61■■□□□ 1.05
LIMS2-201ENST00000324938 RASIP1Q5U651 963 aa21.61■■□□□ 1.05
LIMS2-201ENST00000324938 CNSTQ6PJW8 725 aa21.61■■□□□ 1.05
LIMS2-201ENST00000324938 LRRC8DQ7L1W4 858 aa21.61■■□□□ 1.05
LIMS2-201ENST00000324938 GALNT7Q86SF2 657 aa21.61■■□□□ 1.05
LIMS2-201ENST00000324938 PDCD6IPQ8WUM4 868 aaKnown RBP21.61■■□□□ 1.05
LIMS2-201ENST00000324938 MYCBPQ99417 103 aaPredicted RBP21.61■■□□□ 1.05
LIMS2-201ENST00000324938 OMDQ99983 421 aa21.61■■□□□ 1.05
LIMS2-201ENST00000324938 MRPL57Q9BQC6 102 aaKnown RBP21.61■■□□□ 1.05
LIMS2-201ENST00000324938 GPAMQ9HCL2 828 aa21.61■■□□□ 1.05
LIMS2-201ENST00000324938 MARCH5Q9NX47 278 aa21.61■■□□□ 1.05
LIMS2-201ENST00000324938 VTI1BQ9UEU0 232 aa21.61■■□□□ 1.05
LIMS2-201ENST00000324938 SLCO1B7G3V0H7 640 aa21.6■■□□□ 1.05
LIMS2-201ENST00000324938 AURKAO14965 403 aa21.6■■□□□ 1.05
LIMS2-201ENST00000324938 COX4I1P13073 169 aa21.6■■□□□ 1.05
LIMS2-201ENST00000324938 LEPRP48357 1165 aaKnown RBP21.6■■□□□ 1.05
LIMS2-201ENST00000324938 CLCN5P51795 746 aa21.6■■□□□ 1.05
LIMS2-201ENST00000324938 ARPP19P56211 112 aa21.6■■□□□ 1.05
LIMS2-201ENST00000324938 BTKQ06187 659 aa21.6■■□□□ 1.05
LIMS2-201ENST00000324938 RING1Q06587 406 aa21.6■■□□□ 1.05
LIMS2-201ENST00000324938 MUM1Q2TAK8 710 aa21.6■■□□□ 1.05
LIMS2-201ENST00000324938 PARP15Q460N3 678 aa21.6■■□□□ 1.05
LIMS2-201ENST00000324938 RBM20Q5T481 1227 aaKnown RBP21.6■■□□□ 1.05
LIMS2-201ENST00000324938 LSMEM2Q8N112 164 aa21.6■■□□□ 1.05
LIMS2-201ENST00000324938 OR13J1Q8NGT2 312 aa21.6■■□□□ 1.05
LIMS2-201ENST00000324938 ARRDC2Q8TBH0 407 aa21.6■■□□□ 1.05
LIMS2-201ENST00000324938 ACTRT2Q8TDY3 377 aa21.6■■□□□ 1.05
LIMS2-201ENST00000324938 STARD7Q9NQZ5 370 aa21.6■■□□□ 1.05
LIMS2-201ENST00000324938 ACSS2Q9NR19 701 aa21.6■■□□□ 1.05
LIMS2-201ENST00000324938 COMMD8Q9NX08 183 aa21.6■■□□□ 1.05
LIMS2-201ENST00000324938 ANGPTL2Q9UKU9 493 aa21.6■■□□□ 1.05
LIMS2-201ENST00000324938 SLC12A8A0AV02 714 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 GRID2O43424 1007 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 CCNT2O60583 730 aaKnown RBP21.59■■□□□ 1.05
LIMS2-201ENST00000324938 RAMP2O60895 175 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 VNN2O95498 520 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 GPR17Q13304 367 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 ZNF354CQ86Y25 554 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 PGBD5Q8N414 524 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 HEXDCQ8WVB3 486 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 RPRD1AQ96P16 312 aaPredicted RBP21.59■■□□□ 1.05
LIMS2-201ENST00000324938 CRISPLD1Q9H336 500 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 ZDHHC2Q9UIJ5 367 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 SLC27A5Q9Y2P5 690 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 MROH6A6NGR9 719 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 NPHS1O60500 1241 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 HMBSP08397 361 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 SELPP16109 830 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 TFEBP19484 476 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 SERINC3Q13530 473 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 POLD3Q15054 466 aaPredicted RBP21.59■■□□□ 1.05
LIMS2-201ENST00000324938 MGAT5BQ3V5L5 792 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 RALGPS1Q5JS13 557 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 PGM2L1Q6PCE3 622 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 FRMD7Q6ZUT3 714 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 CNDP1Q96KN2 507 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 CASD1Q96PB1 797 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 SEPT5Q99719 369 aaPredicted RBP21.59■■□□□ 1.05
LIMS2-201ENST00000324938 LBHD1Q9BQE6 289 aaPredicted RBP21.59■■□□□ 1.05
LIMS2-201ENST00000324938 SHCBP1LQ9BZQ2 653 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 CXorf56Q9H5V9 222 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 IGSF5Q9NSI5 407 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 WASF2Q9Y6W5 498 aa21.59■■□□□ 1.05
LIMS2-201ENST00000324938 SLC7A4O43246 635 aa21.58■■□□□ 1.05
LIMS2-201ENST00000324938 ITGAXP20702 1163 aa21.58■■□□□ 1.05
LIMS2-201ENST00000324938 MAPKAPK2P49137 400 aa21.58■■□□□ 1.05
LIMS2-201ENST00000324938 YBEYP58557 167 aaPredicted RBP21.58■■□□□ 1.05
LIMS2-201ENST00000324938 ZNF789Q5FWF6 425 aa21.58■■□□□ 1.05
LIMS2-201ENST00000324938 CIR1Q86X95 450 aaPredicted RBP21.58■■□□□ 1.05
LIMS2-201ENST00000324938 SPATA6LQ8N4H0 392 aa21.58■■□□□ 1.05
LIMS2-201ENST00000324938 OLFM1Q99784 485 aa21.58■■□□□ 1.05
LIMS2-201ENST00000324938 WDR55Q9H6Y2 383 aaPredicted RBP21.58■■□□□ 1.05
LIMS2-201ENST00000324938 UXTQ9UBK9 157 aaPredicted RBP21.58■■□□□ 1.05
LIMS2-201ENST00000324938 PCDHB7Q9Y5E2 793 aa21.58■■□□□ 1.05
LIMS2-201ENST00000324938 GOLGA8QA0A0J9YX86 632 aa21.58■■□□□ 1.04
LIMS2-201ENST00000324938 GOLGA8OA6NCC3 632 aa21.58■■□□□ 1.04
LIMS2-201ENST00000324938 GOLGA8NF8WBI6 632 aa21.58■■□□□ 1.04
LIMS2-201ENST00000324938 ENPP3O14638 875 aa21.58■■□□□ 1.04
LIMS2-201ENST00000324938 TBC1D4O60343 1298 aa21.58■■□□□ 1.04
LIMS2-201ENST00000324938 SNUPNO95149 360 aaKnown RBP21.58■■□□□ 1.04
LIMS2-201ENST00000324938 ATXN1LP0C7T5 689 aaKnown RBP21.58■■□□□ 1.04
LIMS2-201ENST00000324938 ZDHHC11BP0C7U3 371 aa21.58■■□□□ 1.04
LIMS2-201ENST00000324938 HOXD10P28358 340 aa21.58■■□□□ 1.04
LIMS2-201ENST00000324938 SLC11A1P49279 550 aa21.58■■□□□ 1.04
LIMS2-201ENST00000324938 DNAJB13P59910 316 aa21.58■■□□□ 1.04
LIMS2-201ENST00000324938 NSUN2Q08J23 767 aaKnown RBP eCLIP21.58■■□□□ 1.04
LIMS2-201ENST00000324938 SMARCB1Q12824 385 aa21.58■■□□□ 1.04
LIMS2-201ENST00000324938 SLC14A2Q15849 920 aa21.58■■□□□ 1.04
LIMS2-201ENST00000324938 LSM12Q3MHD2 195 aaKnown RBP21.58■■□□□ 1.04
LIMS2-201ENST00000324938 SIRPB2Q5JXA9 342 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms