RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 TECPR2O15040 1411 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 EPHB6O15197 1021 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 MSH4O15457 936 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 DENRO43583 198 aaKnown RBP7.11□□□□□ -1.27
SMC1A-201ENST00000322213 GH2P01242 217 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 PRKACAP17612 351 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 EMC2Q15006 297 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 NR6A1Q15406 480 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 ANKDD1AQ495B1 522 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 SGO1Q5FBB7 561 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 TMC2Q8TDI7 906 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 NPAS2Q99743 824 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 TSEN34Q9BSV6 310 aaKnown RBP7.11□□□□□ -1.27
SMC1A-201ENST00000322213 MTMR12Q9C0I1 747 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 TPK1Q9H3S4 243 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 PDGFCQ9NRA1 345 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.11□□□□□ -1.273e-6■■■■□ 21
SMC1A-201ENST00000322213 ISPDA4D126 451 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 AVILO75366 819 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 BBOX1O75936 387 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 NPY2RP49146 381 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 GNA12Q03113 381 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 TYW3Q6IPR3 259 aaKnown RBP7.11□□□□□ -1.27
SMC1A-201ENST00000322213 KIF12Q96FN5 646 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 FOPNLQ96NB1 174 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 POP1Q99575 1024 aaKnown RBP7.11□□□□□ -1.27
SMC1A-201ENST00000322213 RIT2Q99578 217 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 GRHL1Q9NZI5 618 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 LEF1Q9UJU2 399 aaPredicted RBP7.11□□□□□ -1.27
SMC1A-201ENST00000322213 PNMA8BQ9ULN7 279 aaPredicted RBP7.11□□□□□ -1.27
SMC1A-201ENST00000322213 STON1Q9Y6Q2 735 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 DENND4AQ7Z401 1863 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 F8A1P23610 371 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 PSMA1P25786 263 aaKnown RBP7.11□□□□□ -1.27
SMC1A-201ENST00000322213 CDH17Q12864 832 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 THEM5Q8N1Q8 247 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 SLC7A14Q8TBB6 771 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 HELQQ8TDG4 1101 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 TEKT5Q96M29 485 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 TMEM216Q9P0N5 145 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 NUP50Q9UKX7 468 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 H0Y858 1186 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 H0YIN7 160 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 RNASEH1O60930 286 aaKnown RBP7.11□□□□□ -1.27
SMC1A-201ENST00000322213 VPS26AO75436 327 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 TADA2AO75478 443 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 CYP2C8P10632 490 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 GPSM2P81274 684 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 OR7G1Q8NGA0 311 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 SLC7A8Q9UHI5 535 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 PDE10AQ9Y233 779 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 ECE2O60344 883 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 ASS1P00966 412 aaKnown RBP7.11□□□□□ -1.27
SMC1A-201ENST00000322213 NELFEP18615 380 aaKnown RBP7.11□□□□□ -1.27
SMC1A-201ENST00000322213 CYP4F2P78329 520 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 GSTM4Q03013 218 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 CYP4F3Q08477 520 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 PSMD5Q16401 504 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 DDI2Q5TDH0 399 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 UBR7Q8N806 425 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 PHF21BQ96EK2 531 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 SLC22A4Q9H015 551 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 ZDHHC18Q9NUE0 388 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 ADPRHL2Q9NX46 363 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 WWOXQ9NZC7 414 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 PCDHGC3Q9UN70 934 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 FRMPD3Q5JV73 1810 aa7.11□□□□□ -1.27
SMC1A-201ENST00000322213 PRKD3O94806 890 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 RPS9P46781 194 aaKnown RBP7.1□□□□□ -1.27
SMC1A-201ENST00000322213 POLD2P49005 469 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 ABATP80404 500 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 MPP1Q00013 466 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 PPM1LQ5SGD2 360 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 POTEHQ6S545 545 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 FAM131AQ6UXB0 335 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 ZNF410Q86VK4 478 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 MCOLN3Q8TDD5 553 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 CERS2Q96G23 380 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 PRKD2Q9BZL6 878 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 PIGUQ9H490 435 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 GMIPQ9P107 970 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 PSME2Q9UL46 239 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 PMF1-BGLAPU3KQ54 211 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 TRIM64A6NGJ6 449 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 TRIM64BA6NI03 449 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 C2orf81A6NN90 581 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 TTC23LQ6PF05 361 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 BHLHB9Q6PI77 547 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 UTS2BQ765I0 119 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 ASRGL1Q7L266 308 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 ZDHHC17Q8IUH5 632 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 NIM1KQ8IY84 436 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 MARVELD2Q8N4S9 558 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 COLGALT1Q8NBJ5 622 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 NSUN6Q8TEA1 469 aaKnown RBP7.1□□□□□ -1.27
SMC1A-201ENST00000322213 ACE2Q9BYF1 805 aaPredicted RBP7.1□□□□□ -1.27
SMC1A-201ENST00000322213 UNKQ9C0B0 810 aaKnown RBP7.1□□□□□ -1.27
SMC1A-201ENST00000322213 TSR3Q9UJK0 312 aaKnown RBP7.1□□□□□ -1.27
SMC1A-201ENST00000322213 AP4E1Q9UPM8 1137 aa7.1□□□□□ -1.27
SMC1A-201ENST00000322213 CFL2Q9Y281 166 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms