RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 TOP1MTQ969P6 601 aa16.09■□□□□ 0.17
SHISA2-201ENST00000319420 PTCD3Q96EY7 689 aaKnown RBP16.09■□□□□ 0.17
SHISA2-201ENST00000319420 NMRAL1Q9HBL8 299 aa16.09■□□□□ 0.17
SHISA2-201ENST00000319420 AFF4Q9UHB7 1163 aaKnown RBP16.09■□□□□ 0.17
SHISA2-201ENST00000319420 FBXO5Q9UKT4 447 aa16.09■□□□□ 0.17
SHISA2-201ENST00000319420 TBX21Q9UL17 535 aa16.09■□□□□ 0.17
SHISA2-201ENST00000319420 PCDHGC4Q9Y5F7 938 aa16.09■□□□□ 0.17
SHISA2-201ENST00000319420 EYSQ5T1H1 3165 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 IGLV3-10A0A075B6K4 115 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.08■□□□□ 0.16
SHISA2-201ENST00000319420 CACNG3O60359 315 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 IGLV3-27P01718 113 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 SOD2P04179 222 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 BMP1P13497 986 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 ARCN1P48444 511 aaKnown RBP16.08■□□□□ 0.16
SHISA2-201ENST00000319420 SLC12A2P55011 1212 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 UBAP2LQ14157 1087 aaKnown RBP16.08■□□□□ 0.16
SHISA2-201ENST00000319420 SNX30Q5VWJ9 437 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 CNKSR3Q6P9H4 555 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 RINLQ6ZS11 566 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 RPS27LQ71UM5 84 aaKnown RBP16.08■□□□□ 0.16
SHISA2-201ENST00000319420 OR13C4Q8NGS5 318 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 TBATAQ96M53 351 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 ZNF212Q9UDV6 495 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 AGO1Q9UL18 857 aaKnown RBP16.08■□□□□ 0.16
SHISA2-201ENST00000319420 HBS1LQ9Y450 684 aaKnown RBP16.08■□□□□ 0.16
SHISA2-201ENST00000319420 TRIM43BA6NCK2 446 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 NEMP2A6NFY4 417 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 PSMD3O43242 534 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 BNIP3LO60238 219 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 DIAPH2O60879 1101 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 IL1BP01584 269 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 RHOCP08134 193 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 ZDHHC11BP0C7U3 371 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 TAS2R39P59534 338 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 ZNF33AQ06730 810 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 VEPH1Q14D04 833 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 FSCBQ5H9T9 825 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 TREML1Q86YW5 311 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 RYBPQ8N488 228 aaPredicted RBP16.08■□□□□ 0.16
SHISA2-201ENST00000319420 CCNYL1Q8N7R7 359 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 MAB21L3Q8N8X9 362 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 ARRDC2Q8TBH0 407 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 PPP4R1Q8TF05 950 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 INPP5DQ92835 1189 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 EXT2Q93063 718 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 TRIM43Q96BQ3 446 aaPredicted RBP16.08■□□□□ 0.16
SHISA2-201ENST00000319420 NXNL1Q96CM4 212 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 POLR1EQ9GZS1 481 aaKnown RBP16.08■□□□□ 0.16
SHISA2-201ENST00000319420 CYP4F12Q9HCS2 524 aa16.08■□□□□ 0.16
SHISA2-201ENST00000319420 MARCH4Q9P2E8 410 aaPredicted RBP16.08■□□□□ 0.16
SHISA2-201ENST00000319420 NKX1-2Q9UD57 310 aaPredicted RBP16.08■□□□□ 0.16
SHISA2-201ENST00000319420 TEX28O15482 410 aa16.07■□□□□ 0.16
SHISA2-201ENST00000319420 CHRNGP07510 517 aa16.07■□□□□ 0.16
SHISA2-201ENST00000319420 HTR7P34969 479 aa16.07■□□□□ 0.16
SHISA2-201ENST00000319420 CSHL1Q14406 222 aa16.07■□□□□ 0.16
SHISA2-201ENST00000319420 STXBP5Q5T5C0 1151 aa16.07■□□□□ 0.16
SHISA2-201ENST00000319420 RNF219Q5W0B1 726 aaPredicted RBP16.07■□□□□ 0.16
SHISA2-201ENST00000319420 POTEHQ6S545 545 aa16.07■□□□□ 0.16
SHISA2-201ENST00000319420 TPGS1Q6ZTW0 290 aa16.07■□□□□ 0.16
SHISA2-201ENST00000319420 EFHBQ8N7U6 833 aa16.07■□□□□ 0.16
SHISA2-201ENST00000319420 FBXO27Q8NI29 283 aa16.07■□□□□ 0.16
SHISA2-201ENST00000319420 ACMSDQ8TDX5 336 aa16.07■□□□□ 0.16
SHISA2-201ENST00000319420 SH3RF2Q8TEC5 729 aa16.07■□□□□ 0.16
SHISA2-201ENST00000319420 DNAJC1Q96KC8 554 aaKnown RBP16.07■□□□□ 0.16
SHISA2-201ENST00000319420 TSNARE1Q96NA8 513 aa16.07■□□□□ 0.16
SHISA2-201ENST00000319420 CADM1Q9BY67 442 aaKnown RBP16.07■□□□□ 0.16
SHISA2-201ENST00000319420 RHOJQ9H4E5 214 aa16.07■□□□□ 0.16
SHISA2-201ENST00000319420 THAP1Q9NVV9 213 aa16.07■□□□□ 0.16
SHISA2-201ENST00000319420 MYO9BQ13459 2157 aa16.07■□□□□ 0.16
SHISA2-201ENST00000319420 DOCK6Q96HP0 2047 aa16.07■□□□□ 0.16
SHISA2-201ENST00000319420 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.07■□□□□ 0.16
SHISA2-201ENST00000319420 WASH4PA8MWX3 477 aa16.07■□□□□ 0.16
SHISA2-201ENST00000319420 NEMP1O14524 444 aa16.07■□□□□ 0.16
SHISA2-201ENST00000319420 BIRC5O15392 142 aa16.07■□□□□ 0.16
SHISA2-201ENST00000319420 HSPA4LO95757 839 aa16.07■□□□□ 0.16
SHISA2-201ENST00000319420 PTPN4P29074 926 aa16.07■□□□□ 0.16
SHISA2-201ENST00000319420 ZXDBP98169 803 aa16.07■□□□□ 0.16
SHISA2-201ENST00000319420 ZNF177Q13360 481 aaPredicted RBP16.07■□□□□ 0.16
SHISA2-201ENST00000319420 TRIM42Q8IWZ5 723 aa16.07■□□□□ 0.16
SHISA2-201ENST00000319420 ZNF334Q9HCZ1 680 aaPredicted RBP16.07■□□□□ 0.16
SHISA2-201ENST00000319420 SAR1AQ9NR31 198 aa16.07■□□□□ 0.16
SHISA2-201ENST00000319420 GOLGA8QA0A0J9YX86 632 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 GOLGA8OA6NCC3 632 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 DRGXA6NNA5 263 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 GOLGA8NF8WBI6 632 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 H0Y626 953 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 C1RP00736 705 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 CKMP06732 381 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 SLC35E2BP0CK96 405 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 PAMP19021 973 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 NAGLUP54802 743 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 OXCT1P55809 520 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 NRG1Q02297 640 aaPredicted RBP16.06■□□□□ 0.16
SHISA2-201ENST00000319420 PARP15Q460N3 678 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 PIM3Q86V86 326 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 TTC8Q8TAM2 541 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 MAGEC3Q8TD91 643 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 NSL1Q96IY1 281 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 NSMCE3Q96MG7 304 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms